Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01917 ATGGTGAAAAGAACAAGGGGATCAGAAGCTGGTGTAATCACCACAGGGGATTTGAATTCAGAAATTTCTTATCGAGAGATAGCTAGATGCACTGATGGGTTCTCCCAAGATAACTTGATTGGCTCGGGAAGTTTTGGTTTGGTATACAAAGGAACTCTTGCAAGTAATGGAGCATTTGTCGCGGTGAAAGTATTAAATCTTCAACAAAGAGGAGCTTCAAGGAGTTTCATTGATGAATGCATAGCCTTGAGAAGTATAAGGCACAGAAACCTTCTCAAGATCGTAAGTGCTGTATCAAGCATTGATCACCAAGGTCATGACTTCAAAACTTTGGTGTTTGAGTTCATGTCAAATGGAAATCTAGATGATTGGATACATCAAAAAGATAAAGTGCAACAAGAGAGCAAGAGATTGACATTCATCCAAAGACTGAACATAGCAATTGATGTTGCATGTGCACTTGAATATCTGCACAACTTTTGTCAAACACCTGTCGTGCATTGCGATGTGAAGCCAAGCAATGTACTACTTGATGATGATTTGGTAGCCCATGTGGGTGACTTCGGACTAGCAACCCTTCTATATGAAGAATCAAGCGACTCTTCCACATCCAAAGAAAACTCAACAATGTCATGTTGCCTAAAGGGTTCAATCGGGTACATTCCACCAGAATATGGTATGGGTGGGCAACCTTCAACACTGGGAGATATCTATAGCTATGGGATACTATTGATGGAGATTTTCACAGGAAAGAGACCCACTGATGATGAATTTGAAGGCGGAATGGGAATTCACCAATATGCTGAGATGGCTTTGCCCAATCATGCCATGGAGATTGCTGATCCTTGCTTGCTATCTGAAGAAGAAGAAGAAGAAGAAGAATAG 885 0.4102 MVKRTRGSEAGVITTGDLNSEISYREIARCTDGFSQDNLIGSGSFGLVYKGTLASNGAFVAVKVLNLQQRGASRSFIDECIALRSIRHRNLLKIVSAVSSIDHQGHDFKTLVFEFMSNGNLDDWIHQKDKVQQESKRLTFIQRLNIAIDVACALEYLHNFCQTPVVHCDVKPSNVLLDDDLVAHVGDFGLATLLYEESSDSSTSKENSTMSCCLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLMEIFTGKRPTDDEFEGGMGIHQYAEMALPNHAMEIADPCLLSEEEEEEEE 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01917 294 FunFam LRR receptor-like serine/threonine-protein kinase EFR 8 115 - -
Accr7g01917 294 Gene3D Phosphorylase Kinase; domain 1 16 115 - -
Accr7g01917 294 Gene3D Transferase(Phosphotransferase) domain 1 116 294 - -
Accr7g01917 294 ProSiteProfiles Protein kinase domain profile. 34 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01917 294 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 17 291 - -
Accr7g01917 294 SMART serkin_6 34 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01917 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Accr7g01917 294 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Accr7g01917 294 SUPERFAMILY Protein kinase-like (PK-like) 17 259 IPR011009 -
Accr7g01917 294 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 116 294 - -
Accr7g01917 294 Pfam Protein kinase domain 35 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01917 Accr-Chr7 50845454 50846456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01917 21 285 Receptor kinase-like Gene Family AT3G47090 52.060 1.95e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr7g01917 Pkinase 7.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01917 - - gmx:100785230 417.542