Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01911 ATGGAGGAAGAAGATGTGAGGGTAGGAGCTAATAGGTATGGAGAGAGGCAACCACTAGGATTATCAGCTCAGAGTGAAGATGGAAAAGATTACAGAGAGCCACCAGCTGTTCCATTGTTTGAAGCTGGTGAGCTATCTTCATGGTCTTTTTATAGAGCTGCCATTGCGGAGTTTGTGGCCACTTTCTTGTTCCTATACGTCACCGTTTTGACTGTCATTGGTGTGGCTAAATCTCCTTCTAAGTGCTCCACTGTTGGTACTCAAGGCATTGCTTGGGCTTTTGGTGGCATGATCTTTGCCCTTGTCTACTCCACTGCTGGTATCTCAGGAGGGCACATAAATCCGGCGGTGACATTTGGGCTGTTTCTGGCGAGGAAGGTGTCGCTGACAAGGACGGTGGTGTACATAATAATGCAGTGCTTGGGCGCCATAGCCGGGGCCGCCGTGGTTAAGGGCTTCCAGCCACATACCTACGAGAGACTTGGTGGTGCTGCTAATACTCTCAATTCTGGTTACTCCAAAACCTCAGGCCTTGGAGCTGAGATCCTTGGCACTTTCGTTCTTGTTTATACTGTCTTCTCTGCTACTGATGCCAAGCGAAATGCCAGAGACTCCCATGTCCCTGTGTTGGCACCTCTACCTATAGGGTTTGCTGTGTTTCTGGTGCATTTGGCAACGATTCCTGTGACAGGCACAGGTATCAACCCAGCCAGAAGTCTTGGTGCTGCTCTTATCTTCAACAAGCACCAAGCTTGGCATCATCATTGGATATTCTGGGTTGGGCCTCTCATAGGGGCAGCTCTTGCAGCTTTGTACCACCAGATAGTGATAAGGGCCATCCCCTTCAAGTCAAACTGA 858 0.4942 MEEEDVRVGANRYGERQPLGLSAQSEDGKDYREPPAVPLFEAGELSSWSFYRAAIAEFVATFLFLYVTVLTVIGVAKSPSKCSTVGTQGIAWAFGGMIFALVYSTAGISGGHINPAVTFGLFLARKVSLTRTVVYIIMQCLGAIAGAAVVKGFQPHTYERLGGAANTLNSGYSKTSGLGAEILGTFVLVYTVFSATDAKRNARDSHVPVLAPLPIGFAVFLVHLATIPVTGTGINPARSLGAALIFNKHQAWHHHWIFWVGPLIGAALAALYHQIVIRAIPFKSN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01911 285 NCBIfam MIP family channel protein 56 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 SUPERFAMILY Aquaporin-like 45 278 IPR023271 -
Accr7g01911 285 FunFam Probable aquaporin PIP1-2 37 285 - -
Accr7g01911 285 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
Accr7g01911 285 Pfam Major intrinsic protein 44 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 CDD MIP 52 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 11 281 IPR034294 -
Accr7g01911 285 MobiDBLite consensus disorder prediction 1 30 - -
Accr7g01911 285 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr7g01911 285 ProSitePatterns MIP family signature. 112 120 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01911 Accr-Chr7 50797201 50799358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01911 2 285 Major Intrinsic Protein MIP AT3G61430 79.225 9.26e-163 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01911 K09872 - cave:132192212 496.508