Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01908 ATGGTTGGCAATTGCTTCGGTGCCTTGATTTGTTTTAGAGGGAAGAATAAACCTGCTGACCAGTCAGATGAACAAGTGATTGCAACTAAAACTTTTAGTTACAATTCAATGAGATCAGCAACAGGAGATTTTCATCCGTCGAGCAAAATTGGTGGCGGAGGTTATGGAGTTGTCTACAAGGGAGTTTTAAGAGATGGTACTCAAGTTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGAACAAAGGAATTTATGACAGAAACTGATATTATATCAAAGACACAGCATCCAAACCTTGTGCAACTTATTGGCTGCTGTGTTGAGGGCTCCCATCGGATGTTGGTGTATGAGTTTTTGGAAAATAATAGCCTTGAAAGTCTTTTGCTTGGTTCCAAAAGAAAATCTGCTGCTCTGGATTGGCCAAAGAGGGCTGCTATCTGCTGTGGCACAGCTTCTGGTCTTGAATTTCTTCATGAAGAGGCTCAACCAAATGTTGTTCACAGAGATATCAAGGCTAGCAACATACTGCTTGATGGGGAATTTACTCCTAAAATAGGGGATTTTGGCCTTGCAAAGCTTTTTCCTGACAATGTCACACATGTTAGTACCCGAGTGGCAGGAACTGTGGGATATCTTGCACCGGAATATGCACTTCTAGGACAACTTACAAAGAAGGCAGATGTGTACAGTTTCGGGATTCTTATGCTTGAAATAATTAGTGGTACTAGTAGCAGTAAAGCTGCATTTGGAGATAATCTCTTGGTTCTAGTGGAATGGGCTTGGAAGCTGAGAGAAGAAGGCAGGCTTCTGGATATTGTAGATCCGGAACTAACTGAATATGATGAGAAGCAGGTGTTGCGTTTCATCGTGGTTGCTCTGTTCTGTACCCAAGCAGCCGCACAACACAGACCCACCATGAAGCAAGTAATAAAAATGCTCACCAAGGAAGTGCATTTGAACGAGAGGGCACTAACTGAACCTGGAATTTACAGGTGGAATGGCTCCAAAGAGTACGGCAATTCGTCGTTGGTGGGGACATCGTCTTCTCAAACTGGCAAGCATGGAAATTCCAAATATCCGTACGTGACATCAAGCCATTTTAGCGGTGCTGATTTGGATACACAGATATTTCCTAGGTGA 1143 0.4287 MVGNCFGALICFRGKNKPADQSDEQVIATKTFSYNSMRSATGDFHPSSKIGGGGYGVVYKGVLRDGTQVAIKSLSVESKQGTKEFMTETDIISKTQHPNLVQLIGCCVEGSHRMLVYEFLENNSLESLLLGSKRKSAALDWPKRAAICCGTASGLEFLHEEAQPNVVHRDIKASNILLDGEFTPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGTSSSKAAFGDNLLVLVEWAWKLREEGRLLDIVDPELTEYDEKQVLRFIVVALFCTQAAAQHRPTMKQVIKMLTKEVHLNERALTEPGIYRWNGSKEYGNSSLVGTSSSQTGKHGNSKYPYVTSSHFSGADLDTQIFPR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01908 380 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Accr7g01908 380 SMART serkin_6 44 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01908 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Accr7g01908 380 SUPERFAMILY Protein kinase-like (PK-like) 24 314 IPR011009 -
Accr7g01908 380 FunFam Putative LRR receptor-like serine/threonine-protein kinase 120 326 - -
Accr7g01908 380 CDD STKc_IRAK 63 316 - -
Accr7g01908 380 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01908 380 FunFam serine/threonine-protein kinase PBS1-like 13 119 - -
Accr7g01908 380 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 343 - -
Accr7g01908 380 Pfam Protein tyrosine and serine/threonine kinase 47 314 IPR001245 GO:0004672|GO:0006468
Accr7g01908 380 Gene3D Phosphorylase Kinase; domain 1 11 119 - -
Accr7g01908 380 Gene3D Transferase(Phosphotransferase) domain 1 120 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01908 Accr-Chr7 50764305 50768957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01908 9 329 Receptor kinase-like Gene Family AT1G56120 49.231 1.85e-106 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr7g01908 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01908 - - gmx:100816683 558.91