Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01906 ATGAAAAACGGCAAGGGAGCAGTTGATGATCGAGTGGTTGGCAAGCGAAAGGCTGCTCTAAAGCCTGACTCGAGCAGTGCAAAATTGTCCAAGAAGGCGAGGAATGCCAAGAAAGATCCCAACAAACCAAAAAGACCGCCCAGTGCTTTTTTTGTTTTCCTTGAGGAGTTCAGAAAGACCTTTAAGGCAGAAAATCCTAATGTGAAGGCTGTATCTGCTGTGGGGAAGGCTGGAGGAGCGAAATGGAAATCTATGACTCCTGCTGAGAAAGCTCCATATGAAGACAAAGCTGCAAAAAAGAAAGCTGAGTATGAAAAACTCATGAATGCATATAATAAAAAGCCGACAAACCCAGTCAATGACAAAGATGAGGAATCGGATAAGTCCAAGTCTGAAGTGCATGATGAAGAGGATGAAGCCAGTGGAGAGGAAGCACACCAAGAAGAGGAAGATGACGAAGACGAGGATGATGAAGAAGATGATGATTGA 489 0.4417 MKNGKGAVDDRVVGKRKAALKPDSSSAKLSKKARNAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSAVGKAGGAKWKSMTPAEKAPYEDKAAKKKAEYEKLMNAYNKKPTNPVNDKDEESDKSKSEVHDEEDEASGEEAHQEEEDDEDEDDEEDDD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01906 162 MobiDBLite consensus disorder prediction 74 162 - -
Accr7g01906 162 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 4 148 IPR031061 -
Accr7g01906 162 MobiDBLite consensus disorder prediction 1 47 - -
Accr7g01906 162 MobiDBLite consensus disorder prediction 117 136 - -
Accr7g01906 162 MobiDBLite consensus disorder prediction 1 44 - -
Accr7g01906 162 MobiDBLite consensus disorder prediction 88 108 - -
Accr7g01906 162 CDD HMG-box_AtHMGB1-like 44 104 - -
Accr7g01906 162 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 43 112 IPR009071 -
Accr7g01906 162 Gene3D High mobility group box domain 26 128 IPR036910 -
Accr7g01906 162 Coils Coil 94 114 - -
Accr7g01906 162 Pfam HMG (high mobility group) box 43 112 IPR009071 -
Accr7g01906 162 SUPERFAMILY HMG-box 29 115 IPR036910 -
Accr7g01906 162 MobiDBLite consensus disorder prediction 137 162 - -
Accr7g01906 162 SMART hmgende2 42 113 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01906 Accr-Chr7 50727774 50729977 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Accr7g01906 HMG_box 2e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01906 K25507 - aew:130794744 153.68