Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr7g01889 | ATGTGGATGAATTTTACAGATTCTGTGATCCAGGAGAATTTGTGCCTTTATGGACATCCAAATGAAACCTGGGAAGTAACTCTGCCAGCAGAGGAAGTTCCCCCGGAGCTTCCTGAGCCAGCTCTCGGAATCAATTTTGCTAGGGATGGCATGATGCGCAGGGACTGGCTTTCTCTTGTTGCTGTTCACAGTGATTCATGGCTGCTTTCTGTGGCATTTTATCTCGGGGCCCGTCTCAACCGTAATGAAAGGAAGCGTTTATTTAGCTTGATCAATGATCTTCCCACCGTCTTTGAAGTTGTGACTGAGAGAAAGGCTATAAAGGACAAGCCAACTGTGGACAGTGGAAGCAAGTCCAGGGGAAGCTCCAAGAGATCACTTGATGGGCTAGTTAAAGGCAATCCCAAGTTTGCAGATGAGGGTTATGAGGAGGATGAAGATGAGCATAGTGAAACCCTTTGTGGGAGCTGTGGTGGAAACTACAATGCCGATGAATTTTGGATTGGCTGCGATGTCTGCGAGAGGTGGTTTCATGGGAAATGTGTGAAGATCACCCCTGCCAAGGCTGAGAGCATAAAGCAATACAAATGTCCATCTTGCATGAAGCGGGGCAAGCCCTAG | 621 | 0.4767 | MWMNFTDSVIQENLCLYGHPNETWEVTLPAEEVPPELPEPALGINFARDGMMRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSLINDLPTVFEVVTERKAIKDKPTVDSGSKSRGSSKRSLDGLVKGNPKFADEGYEEDEDEHSETLCGSCGGNYNADEFWIGCDVCERWFHGKCVKITPAKAESIKQYKCPSCMKRGKP | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr7g01889 | 206 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 151 | 202 | IPR013083 | - | |
Accr7g01889 | 206 | Pfam | PHD-finger | 154 | 202 | IPR019787 | - | |
Accr7g01889 | 206 | SMART | PHD_3 | 153 | 201 | IPR001965 | - | |
Accr7g01889 | 206 | FunFam | PHD finger alfin-like protein | 146 | 202 | - | - | |
Accr7g01889 | 206 | ProSitePatterns | Zinc finger PHD-type signature. | 154 | 200 | IPR019786 | - | |
Accr7g01889 | 206 | Pfam | Alfin | 11 | 102 | IPR021998 | GO:0006355|GO:0042393 | |
Accr7g01889 | 206 | PANTHER | CPG BINDING PROTEIN | 11 | 203 | IPR045104 | GO:0006355|GO:0042393 | |
Accr7g01889 | 206 | MobiDBLite | consensus disorder prediction | 109 | 144 | - | - | |
Accr7g01889 | 206 | SUPERFAMILY | FYVE/PHD zinc finger | 142 | 204 | IPR011011 | - | |
Accr7g01889 | 206 | CDD | PHD_AL_plant | 153 | 203 | IPR044104 | - | |
Accr7g01889 | 206 | ProSiteProfiles | Zinc finger PHD-type profile. | 151 | 203 | IPR019787 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr7g01889 | Accr-Chr7 | 50565032 | 50567460 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr7g01889 | 12 | 205 | Alfin-like Transcription Factor Family | AT5G05610 | 79.082 | 2.73e-95 | 276 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Alfin-like | Accr7g01889 | Alfin | 1.3e-49 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr7g01889 | K26274 | - | mof:131143509 | 362.073 |