Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01889 ATGTGGATGAATTTTACAGATTCTGTGATCCAGGAGAATTTGTGCCTTTATGGACATCCAAATGAAACCTGGGAAGTAACTCTGCCAGCAGAGGAAGTTCCCCCGGAGCTTCCTGAGCCAGCTCTCGGAATCAATTTTGCTAGGGATGGCATGATGCGCAGGGACTGGCTTTCTCTTGTTGCTGTTCACAGTGATTCATGGCTGCTTTCTGTGGCATTTTATCTCGGGGCCCGTCTCAACCGTAATGAAAGGAAGCGTTTATTTAGCTTGATCAATGATCTTCCCACCGTCTTTGAAGTTGTGACTGAGAGAAAGGCTATAAAGGACAAGCCAACTGTGGACAGTGGAAGCAAGTCCAGGGGAAGCTCCAAGAGATCACTTGATGGGCTAGTTAAAGGCAATCCCAAGTTTGCAGATGAGGGTTATGAGGAGGATGAAGATGAGCATAGTGAAACCCTTTGTGGGAGCTGTGGTGGAAACTACAATGCCGATGAATTTTGGATTGGCTGCGATGTCTGCGAGAGGTGGTTTCATGGGAAATGTGTGAAGATCACCCCTGCCAAGGCTGAGAGCATAAAGCAATACAAATGTCCATCTTGCATGAAGCGGGGCAAGCCCTAG 621 0.4767 MWMNFTDSVIQENLCLYGHPNETWEVTLPAEEVPPELPEPALGINFARDGMMRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSLINDLPTVFEVVTERKAIKDKPTVDSGSKSRGSSKRSLDGLVKGNPKFADEGYEEDEDEHSETLCGSCGGNYNADEFWIGCDVCERWFHGKCVKITPAKAESIKQYKCPSCMKRGKP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01889 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 202 IPR013083 -
Accr7g01889 206 Pfam PHD-finger 154 202 IPR019787 -
Accr7g01889 206 SMART PHD_3 153 201 IPR001965 -
Accr7g01889 206 FunFam PHD finger alfin-like protein 146 202 - -
Accr7g01889 206 ProSitePatterns Zinc finger PHD-type signature. 154 200 IPR019786 -
Accr7g01889 206 Pfam Alfin 11 102 IPR021998 GO:0006355|GO:0042393
Accr7g01889 206 PANTHER CPG BINDING PROTEIN 11 203 IPR045104 GO:0006355|GO:0042393
Accr7g01889 206 MobiDBLite consensus disorder prediction 109 144 - -
Accr7g01889 206 SUPERFAMILY FYVE/PHD zinc finger 142 204 IPR011011 -
Accr7g01889 206 CDD PHD_AL_plant 153 203 IPR044104 -
Accr7g01889 206 ProSiteProfiles Zinc finger PHD-type profile. 151 203 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01889 Accr-Chr7 50565032 50567460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01889 12 205 Alfin-like Transcription Factor Family AT5G05610 79.082 2.73e-95 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Accr7g01889 Alfin 1.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01889 K26274 - mof:131143509 362.073