Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr7g01837 | ATGCCAAGGCTCCGATGGACTCCTGATCTTCATCTTCGCTTTGTTCATGCCGTTCAAAGGCTTGGAGGAGAAGAAAGAGCAACACCAAAGTTGGTTCTCCAACTAATGAACATCAAAGGCTTGAGTATTGCTCATGTGAAGAGTCATCTACAGATGTTTAGGAGCAAGAAGGTAGATGATCCAAGTCAAGTATTGGCTGATCATAGGCACCTTGTAGAAAGTGGAGACAGAAATATGTACAGTCTCAGCCAAATTCCCATGCTTCAAGGTTATAATCCCTGCCAAACTTCAACCTTCAGATATGGATATGGGGATGCTTCTTTGAGTTTGTATGACAAAATGGTTCATAGCCCTTTCAATATGGGTCGGAGTCTGGATATGGATCATGAATCCGGGTCATCCGGTGGGTTTCACAATATTTTCCAGGTGGATCCTTCAAATTTTCTGAAGCAATCATCAACAACAAACAAAATCTATGAGGCAAAAGAAAATCAAATCCTCTCATTTGGTGGCCATCATCATCACGAACCCATATACAATATTGGAACCAGATTGAGCCTTCAGAATAATAACATTTCTGATCTTAACTACTCATTGACCCATATAGGACCAATAATAAGATCAGAGGAACAGTTTCTTCCTTTTATGAAGGATCATGATAATCAAACAAAGACGACGACGCTGAAAAGAAAGGCTTGTGATTCTGATCATAATAATAACCACCACCTTGATTTGGATCTATCGCTCAAGTTAAGCTCAACAGTTGATATTGATAGCGCACAGAAGAATCCTCATCAAGAAATGAATAATTTGGAGGAGAATGATGAAGAAGAAGATGATAGAAATCTCTCACTGTCTTTGTATTCTCAAATTTCATCGTTTTCTGATACTAATAATAAGTATGCTAGGAACAGCTTCAAGGAAGGTGGACACAGTGATTATAAGGAGAGATCAAGGAGGGAAAAGGCTAGTACACTGGATCTGACTATATGA | 993 | 0.3917 | MPRLRWTPDLHLRFVHAVQRLGGEERATPKLVLQLMNIKGLSIAHVKSHLQMFRSKKVDDPSQVLADHRHLVESGDRNMYSLSQIPMLQGYNPCQTSTFRYGYGDASLSLYDKMVHSPFNMGRSLDMDHESGSSGGFHNIFQVDPSNFLKQSSTTNKIYEAKENQILSFGGHHHHEPIYNIGTRLSLQNNNISDLNYSLTHIGPIIRSEEQFLPFMKDHDNQTKTTTLKRKACDSDHNNNHHLDLDLSLKLSSTVDIDSAQKNPHQEMNNLEENDEEEDDRNLSLSLYSQISSFSDTNNKYARNSFKEGGHSDYKERSRREKASTLDLTI | 330 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr7g01837 | 330 | FunFam | Myb family transcription factor | 1 | 58 | - | - | |
Accr7g01837 | 330 | Pfam | Myb-like DNA-binding domain | 4 | 52 | IPR001005 | - | |
Accr7g01837 | 330 | Gene3D | - | 1 | 58 | - | - | |
Accr7g01837 | 330 | MobiDBLite | consensus disorder prediction | 299 | 330 | - | - | |
Accr7g01837 | 330 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 2 | 57 | IPR006447 | GO:0003677 | |
Accr7g01837 | 330 | MobiDBLite | consensus disorder prediction | 306 | 330 | - | - | |
Accr7g01837 | 330 | SUPERFAMILY | Homeodomain-like | 2 | 56 | IPR009057 | - | |
Accr7g01837 | 330 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 1 | 287 | IPR044847 | GO:0000976|GO:0006355|GO:0010158 | |
Accr7g01837 | 330 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 1 | 58 | IPR017930 | - | |
Accr7g01837 | 330 | MobiDBLite | consensus disorder prediction | 261 | 281 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr7g01837 | Accr-Chr7 | 49924754 | 49926339 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr7g01837 | 1 | 63 | G2-like Transcription Factor Family | AT2G42660 | 79.365 | 1.59e-29 | 112 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Accr7g01837 | Myb_DNA-binding | 1.2e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr7g01837 | - | - | pcin:129291537 | 369.392 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Accr7g01837 | 7 | 49924754 | 49926339 | Accr7g01837 | 7 | 49924754 | 49926339 | ECH |