Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01828 ATGAAGAATAAAAAAGTGCATGCCATCTTGGGGCCCCGGAACTCAGAGCAAGCAAGGTATATAGTGAGACTTGGTGAGGTAGAATTCCAAAAACCTGTTATTTGGTTTCCCATGACTGGCCCATCTCTTTTGCCTCCTCCATCGCCATCTTCCATCTACACCGGCCAAGGCCTTAATTGCTATCAGTTCCAAGCTATAGCTGCCATTATCAAAGCTCTTGGGTGGCAATCTATTGTCCCCATTTATGAAGAGACAGAATATGGCAGTCACCTTGTTCCATGCCTCACCAATGTGTTGAAAGAGATGGGCATACAAATGGCTAACGTAACAGCCATTGATTCAAGTTCAAGAGATATCAACAGCATTCTTGACACGTTAACCAACATGAGAACACATGTATTTCTTGTCCATATGAGCATGGATTTGGGAACAAGCTTTATTTTGTCTGCACAGAAAAAAGAGATGATCGGTGAAGGGTATGCTTGGATACTTACCCAAGAGCTATCTTCTTTGACAGATCCTCAAGTTCCGCTAGTCAGAAACTTGTATAATGGCTCACCTGTCCCAGTTGATAATTTTACTGATTTTGTTTCTTTGAAAAGATACATGCAAGGGGCATTGGGAGTGCGGCCAATGGATTCGAACAAAACAGATTTGCGTAGGGCTAAAGAGAAGAATTTCACTGATCGTTTCCTAGGTACCCTACCTATCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCAGTAGAGAAAGTAGAGAAGGCAGGCACAGACAATGGCCTAACACTCGGCGATGAAATTAGGGCTACTACTTTCACGGGCGTGTCAGGGGTAAAATTTAATCTAAGTCAAGGACAACTAGACCAATCGGAGTATGAAGTATACAATGTGATATCTGCAAGAGAAAGGATCATTGGATTTTGGAGCCCTAAAAATGGACTTGTTCAAGATCATATTGAAGGAGGTGGCGGTGGGGAGGCATCTGGTGGCCGTGAATACCAACTAAAGGATCCACTGTGGTCGGGTGACACATTGGCTAAACCACCAAAGTTGAGGATTGGAGTTCCAAGAACAAATTATTTTCCTGAATTTGTGCATGTGTATAATTCCAGTAACTCCAGTAAGCTTCAGGTTGATGGCTTTGCTTATAATGTGTTCTTAAAAGCTCTTGATGTTTTGCCATTTCCGTTAAATAATTATGAGTTCGTTCCCTTGCCGAACAAAAGTAGAAGCGATAACACCACCTATGATGACATGCTCTGCACTCAAATGAAACAGGAGGATCTTGATGCTATAATTGGGGACATCACAGTAGTAGCAAGTCGCACAAATTGTGTTGATTTCACGTTGCCGTATTTAGATTCAAGCGTTGCAATGGTAGTTAGGATGAAGAATGCCTCCACTTCTGGGATCCTCTTGAAACCTTTCGGAGGGTTACTGTGGTTAACTCTTGGTTTGATTTTTGTGGCTGCAACCATTATCATACTTCTATTAGAAAAATACAAAACCAAAAGCAACGAAATAAAAAAAATGGACCAATTTCTCATAAACCCCTTCCTTGTTTACAAGATAGATGTTATGGAGAAATTTGCAAGCAGTGCTGCAGGATGGATGGTGATACTGACGTCATTCCTATTCATCTTAGTAGTGCAAGTTTACACAGCCAATTTAACATCAATTTTGACACAAGGAAAAGAGAGGGAGCCTACATTTAAGGATGAATACGTGATCAACAAAAGTAGCAATTTGCACGTGGGATATCGAAATGGGTCGTGGGTGAGAGAGCTTCTAACTGAACAACTAGGATTCTGCTCGTCTCGGTTAATAGCTCTAAATAGTCCTGAAGAGTATAATGAAAGATTGTCAAGGGGAACCAAAAAAGGAGGAGTGGATGCTATTTTTGATGAAACTCCATATCTCACGCTCTTTCTCTCTGAATATAAGTCTGGCTTCATGATGACAGGACCAATCTATAAAACTGGTGGATTTGCATTTGCATTCCCCAGGAAATCTAGCCTGGGCTTGCACTTCTCGAACGCAATCTTAAAGGTGACTCAAGATGCAGAGCCATATAGTGTGCTGATGGCAAGGAGCTCCTTACCAACCTCCATTGAAGATTTGGAATTTGAAGACGAAAGTGACATAGAGACGTCAAAATTGGAGATAGATATCTTTGGAGGCCTTTACCCTGTCCTATTATCTGTTGTGGCTCTCTTTTTATGCCTTTCTATTCCAATACTGATTGAATGGTGGCGTAAGAAGTAG 2277 0.4159 MKNKKVHAILGPRNSEQARYIVRLGEVEFQKPVIWFPMTGPSLLPPPSPSSIYTGQGLNCYQFQAIAAIIKALGWQSIVPIYEETEYGSHLVPCLTNVLKEMGIQMANVTAIDSSSRDINSILDTLTNMRTHVFLVHMSMDLGTSFILSAQKKEMIGEGYAWILTQELSSLTDPQVPLVRNLYNGSPVPVDNFTDFVSLKRYMQGALGVRPMDSNKTDLRRAKEKNFTDRFLGTLPIYGWWAYHTIEALAMAVEKVEKAGTDNGLTLGDEIRATTFTGVSGVKFNLSQGQLDQSEYEVYNVISARERIIGFWSPKNGLVQDHIEGGGGGEASGGREYQLKDPLWSGDTLAKPPKLRIGVPRTNYFPEFVHVYNSSNSSKLQVDGFAYNVFLKALDVLPFPLNNYEFVPLPNKSRSDNTTYDDMLCTQMKQEDLDAIIGDITVVASRTNCVDFTLPYLDSSVAMVVRMKNASTSGILLKPFGGLLWLTLGLIFVAATIIILLLEKYKTKSNEIKKMDQFLINPFLVYKIDVMEKFASSAAGWMVILTSFLFILVVQVYTANLTSILTQGKEREPTFKDEYVINKSSNLHVGYRNGSWVRELLTEQLGFCSSRLIALNSPEEYNERLSRGTKKGGVDAIFDETPYLTLFLSEYKSGFMMTGPIYKTGGFAFAFPRKSSLGLHFSNAILKVTQDAEPYSVLMARSSLPTSIEDLEFEDESDIETSKLEIDIFGGLYPVLLSVVALFLCLSIPILIEWWRKK 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01828 758 SMART GluR_14 356 695 IPR001320 GO:0015276|GO:0016020
Accr7g01828 758 SUPERFAMILY Periplasmic binding protein-like I 2 313 IPR028082 -
Accr7g01828 758 Gene3D - 475 592 - -
Accr7g01828 758 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 8 755 IPR015683 -
Accr7g01828 758 Pfam Bacterial extracellular solute-binding proteins, family 3 423 692 IPR001638 -
Accr7g01828 758 Gene3D - 60 246 - -
Accr7g01828 758 Pfam Receptor family ligand binding region 3 301 IPR001828 -
Accr7g01828 758 Gene3D - 350 474 - -
Accr7g01828 758 SUPERFAMILY Periplasmic binding protein-like II 348 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01828 Accr-Chr7 49519657 49522765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01828 1 748 Ion Channels AT2G29120 32.746 8.91e-96 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01828 K05387 - qsu:111985484 461.455