Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01827 ATGCAAGCAGCTGGTAGGCTCATAAAGGAAGCCAAAGTGCGTGCCATATTGGGGCCCCAAAATTCGGAGCAAGCAAGGTATGTAGTGAAGCGTGGTGCGATGGAGGAAAACCAAGTACCTGTTATTTGGTTTCCCATAACTGGTCCATCTCTTTTGCCACCTTCTTCCCCATCCTCCATCTACTCCGATAAAGGCCTTAACTGCTTTCAGTTCCGAGCTATAGCTGACGTTATTAAAGCTCTTGGTTGGCAATCAATCGTCCCCATTTATGAAAAGACTGAATATGGCAGTCACCTTCTTCCTTGCCTCACCAATGTCTTGAAAGATATGGGCGTAGAAATGGCTAACGTAACTGCTATTGCTTCACAAGTTGAAGGTATTAACAGCACTCTGGACAAGTTAAAAGACATGCGAACACATGTATTTCTTGTCCATATGAGCATGTATTTTGGAACAGAATTAATTTTGTCTGCAGGAAGAAAAGAGATGATGGGTGAAGGGTTTGCTTGGATACTTACCCAAGAGCTATCTTCTCTGACATATCCTCAAGTTAATACTAAGAGAGAATTGTATAACGCCGACCTATCTTCTGTTTTAACAAATTTTAATGAACTAGTTCCTTTAACAAGGTACATGCAAGGTGCATTGGGAGTGAGGCCAAGGGATCCGGAAAAAACAAAAACACGTGTGGAGAAAGAGACAAATTTCTCTAAAAGTTTCAAAAGCAGGCTAACTATCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCTTTAGAGAAGCCAGGCAGCACAGACAATGGCCAGACACTTCGCAATGAAATTGAGGCTTTTACTTTCACAGGCGTGTCAGGGGTAAAGTTTAATTTAAGTCAAGGACAACTAGATCAATCTGAGCTTGAAGTATACAATGTTGTAGGAGACAGTGAAAGGATCATTGGAAATTGGAGCCCAGAGGAGGGGCTATTTCAAAATCAAAGTAGTAATAAAGGTGGTGAGACTGCTGGTGAATACAAGGTAAAGGATCCATTGTGGCCGGGTAACACACTGGATAAACCACCAAAGTTGAGAATTGGAGTCCCAACAAAAAATTCTTCTCCTGAATTAGTGGATGCTGATAATTCTAGCGAACGGCTCACGATTGATGGCTTTGCCAAGAATGTGTTCTTAAAAGCTCTTGATGTTTTGCCCTTTCGGTTAAATAATTACGAGTTTGTTCCGTTGCCCAACATGACGTATGATGATATTCTCTGCAGCAAAATGAAAGAGAAGGATCTTGATGCTATAATTGGAGACATCACAATTGTGGCGAATCGCACAAATTGTGCTGATTTCACGTTTCCGTATTTGGATTCAAGTGTAGCAATGGTGGTAAGAGTGATGGATGCCTCCACAAATAAGCTGATCCTCGTCAAACCTTTCAACGGGTTACTCTGGTTGCTTTTTTGTCTGATTTTTGCAGTTGCAACTACTATCATAATTTTATTTTTACAAATAAATGAAACCAGAAACAGAACCAACCAAACCGGTGGAGGAGACGAAACCGGGGGAGGAAACGGAACCAGCCTATCCGGTGGAGGAAATGAAACCAATGGAGGAAATAGAACCAACCAAACTGGTGCAGGAAGCAGAAACGGTGGAGGAAACGGAACCAGCCAAACTGGTGGAGGAAATAGAACTAGCCAAACCGGTGCAGGAAATGGAACCAGCCAAACTGGTGAAGGAAATGGAACCAGCCAAACCGGTGCAGGAAACAGAACCAACGGAGGAAACGGTACCAGCCAAACTGGCGAAGGAAACGAAATCAACCAAACTGGTGGAGGAAACGGTGCTAGCCAAACCGGTGAAGGAAACAGTGCCAGCCAAACCGATGCAGGAAATGGAAACAGCCAAACCGGTGCAGGAAACAGAACCAGGGGAGGAAAAGGAACGATCCAAACTGGTGTAGGAAACGGAACCAGCCAAACCGGTGCAGGAAACAGAACCAGCCAAAGCGGTGCAGGAAATGGAACCAGCCAAATTGGTGAAGCAAAAGGTGCCAGCCAAACCGATGTAGGAAACAGAACCAGCCAAATCGGTGCAGGAAACGGAACCAGCCAAGTCAGTGCAGGAAACAGAACCGGTGGAGGAAATGGAACCAGCCAAACCGGTGTAGGAAACGGAACCAACCAAACCGGTGGAGGAAATGGAGCCAGCCAAACCGGTGGAGGAAACGGAACCAACCAAACTGGTGAAGGAAATGGAACCAACCAAACTGGTGAAGGAAATAGAAACAACCAAACGGATGGAGAATATCGCTTCAATCCCTTCCTTGTTTACAAGATGGATGTTATGGAGATCAATTCAACAAGCAAAGCTGCAGGATGGCTGGTGATACTGACGTCATTTCTATTTATCTTTATAGTGCAAGTTTACACAGCGAGTTTAACTTCGATTTTAAATCAAGGAAAAACGAAAGAGCCCTTATTTATGGACGAGAAGGAGCTTAAGAGTAGCAATCTGTCGGTGGGATATCAAAATGGGTCATGGGTGAGAGGGCTTCTGATTGAACAAATAGGATTCAATCCATCTCAGTTAAAGGGTTTAGGAAGTCGTGAAGAGTATGATGAAGAATTGTCAAGAGGCACACAAAATGGAGGAGTTGATGCTATTTTTGATGAAACTCCTCATCTCACACTCTTTGTCTCCCAATACAAGCCTCGCTTTATGATGACTGGACCTATCTATCAAACTGGTGGATTTGCCTTTGCATTCCCAAAGAAATCTAGTCTGGCCCCACATTTCTCGAATGCAATTTTAGATGTGGCTCATGATGTGGAGACATACCGTGTGTTGATGGCTAAGAGCTCCTTACCCACTTCCATTGAAGATTTGCAATTACAAGACCAAAAGTGA 2904 0.4387 MQAAGRLIKEAKVRAILGPQNSEQARYVVKRGAMEENQVPVIWFPITGPSLLPPSSPSSIYSDKGLNCFQFRAIADVIKALGWQSIVPIYEKTEYGSHLLPCLTNVLKDMGVEMANVTAIASQVEGINSTLDKLKDMRTHVFLVHMSMYFGTELILSAGRKEMMGEGFAWILTQELSSLTYPQVNTKRELYNADLSSVLTNFNELVPLTRYMQGALGVRPRDPEKTKTRVEKETNFSKSFKSRLTIYGWWAYHTIEALAMALEKPGSTDNGQTLRNEIEAFTFTGVSGVKFNLSQGQLDQSELEVYNVVGDSERIIGNWSPEEGLFQNQSSNKGGETAGEYKVKDPLWPGNTLDKPPKLRIGVPTKNSSPELVDADNSSERLTIDGFAKNVFLKALDVLPFRLNNYEFVPLPNMTYDDILCSKMKEKDLDAIIGDITIVANRTNCADFTFPYLDSSVAMVVRVMDASTNKLILVKPFNGLLWLLFCLIFAVATTIIILFLQINETRNRTNQTGGGDETGGGNGTSLSGGGNETNGGNRTNQTGAGSRNGGGNGTSQTGGGNRTSQTGAGNGTSQTGEGNGTSQTGAGNRTNGGNGTSQTGEGNEINQTGGGNGASQTGEGNSASQTDAGNGNSQTGAGNRTRGGKGTIQTGVGNGTSQTGAGNRTSQSGAGNGTSQIGEAKGASQTDVGNRTSQIGAGNGTSQVSAGNRTGGGNGTSQTGVGNGTNQTGGGNGASQTGGGNGTNQTGEGNGTNQTGEGNRNNQTDGEYRFNPFLVYKMDVMEINSTSKAAGWLVILTSFLFIFIVQVYTASLTSILNQGKTKEPLFMDEKELKSSNLSVGYQNGSWVRGLLIEQIGFNPSQLKGLGSREEYDEELSRGTQNGGVDAIFDETPHLTLFVSQYKPRFMMTGPIYQTGGFAFAFPKKSSLAPHFSNAILDVAHDVETYRVLMAKSSLPTSIEDLQLQDQK 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01827 967 SMART GluR_14 360 946 IPR001320 GO:0015276|GO:0016020
Accr7g01827 967 Pfam Receptor family ligand binding region 5 310 IPR001828 -
Accr7g01827 967 MobiDBLite consensus disorder prediction 507 765 - -
Accr7g01827 967 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 941 IPR015683 -
Accr7g01827 967 Gene3D - 69 259 - -
Accr7g01827 967 Gene3D - 355 476 - -
Accr7g01827 967 SUPERFAMILY Periplasmic binding protein-like II 355 940 - -
Accr7g01827 967 MobiDBLite consensus disorder prediction 325 374 - -
Accr7g01827 967 Pfam Bacterial extracellular solute-binding proteins, family 3 406 942 IPR001638 -
Accr7g01827 967 SUPERFAMILY Periplasmic binding protein-like I 2 350 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01827 Accr-Chr7 49417822 49422417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01827 806 938 Ion Channels AT2G29110 42.105 1.04e-19 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01827 K05387 - cave:132189743 298.516