Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01826 ATGGCAGAGTTGCAGAAAAGCTTCAAAGCTTCCCTGTTAAGTATGAGTGGCCTTCTTCTCTTAGTATTATTGTGCCTTCACATCACAGCAAGAGCTTCCATGGCGGCCACAAATGAGCAGAAGAAAAGACTAATTCCAGTAGGAGTCATTCTTGATCTGCATTCAGCACTTGGTTCCATGGTCAACGGCAGCCTCGCTCTCGCCCTCGAAGATTACTACTCCGTTCATACGGATACAGCCACCAAGATCGACCTTAAAGTCAGGAATGCTTCTCACGACAACGTCCTCGATGCTGCAAAAGCAGCTTGGGATCTAGTAAAAAAAGAAAATGTGACGGCAATCTTGGGACCTGAAAACTCTGAGGAAGCAAGGTACGTTGTAGATCTTGGTAACACAGCTTATGTACCTGTGATTTGGTTTTCTCCATCTGGTCCATCTCTATTGCCGCCTCGTACCCGGTTCTTCATCACCTCCGACTCCACCAGAAGCCATTGCTCTCAATTCGAAGCTATAGCTGCCATTATCAAAGCCTATAATTGGCAGTCTGTGATCCCCATTTATGAAGAACCTCAATTCGGCGATGACCTGATTCCATGTCTCTATTATGCCTTGCAAGACATGGACACTCAAGTGCCTTACATAAGTGCCATTCGTCAAAATTTCACGGATGTTCAAATCACCAAGGAGCTTGACATGATAAAAGACAAGCGAACATATGTGTTTGTCGCCCATATGACGGTGGAGCTTTGGTCAAGACTTGTGCAACATGCAAAATCTGCGGGGCTGGTTGATAAAGGATGCGCTTGGATACTTACGCAAGGCCTATCTTCTGTGCTAGATCCCAAAGCTTTAAATATAAAAGTGAAAGGCTACATGGATGGTGCTTTGGGTGTGAGGCCATCATTGGCTGATTCCAACATAACCAAGCGAGTTGAGTTAGGGAGAAGAATTGTGCCTCAGTACGGTAAAAGTCTGTCTCTATATGGCCTGTGGGCTTATGACACTATCACAGCATTGGCCAATGCAGTTGAGAAAGCCGGCTTAGCCAATTCTGATGAAAGCAGAGGTGATCTTCGCAACGAAACAGGCCCGGAACTTCTCAAAGCAATTCTGTCAGAGAATTTCACAGGTCTGTCAGGGAATTTCAATTTGAGTCTAGGACAATTAGAACCATCACAATTTGTAATATACAATGTGCAAGCCAAAAGAGACATAATCTTTGGAAATTGGAGCCATAAAACAGGACTTGTTCCAGATGCCAGCGTAATAGTTGAATGGCCGGGTAACGCAAAGGAGAGACCACCAAAGTTGAAAATTGGGGTCCCAAAAACGCATTTTACTGAATTTGCTGGTTTTACTGTAGAAGGACAGAATGTATCAGCTACTGGTTTTGCTGTTGAATTGTTTAAACAAGTGGTTGATGTTTTGCCATTTCCTTTACCTTATGAGTTTGTGCCCCTGAACAGCGTTAGTCCCTCGAGCTATGATGATCTTCTCTGCCAAATGAAAGACAAGAATGTTGATGTTTTAATTGGAGACATTACGGTTGTAGCAAGTCGCAAAAATTGTGTTGATTTCACAATGCCGTATCTAGATTCAAGACTGTCAATAGTGGTAAAGGTGAGGTCCGACTCCGACTCTAAAAATGGGGGGACCTTTCTCGAACCATTTAGTCGGTCAATTTGGTTAAGTCTTGCTGTGGGTGTTGCGGGTGCAGCTGTTACTGTGAGTGTAATTATATTTGAAATAAGAAAGATGAATGAAGGAAGCAATTGGCATCCCTTTTTTCTCAATCCCTTGCTTATTTACGTGAGTGGTGTTGACATTTTGAAAAGCAGGACGTCTAAATGGGTGATGGTATTGGTGATGTTTGTGTTGGGCATAGCAATGCAAGTTTACACAGCATATTTATCATCAATTTTATCAGAGAGGACAATGGCGAAGCCATCTCCATGGAGGGACTTGCAAGATATTAAAAGGAACAATGGGTCCTTGGGATATCAAAAGGACTCCTGGGTGAAAGATCTTCTGATTGATCAAATAAAATTGAAGGACCATCAGTTAAAGGCTCTAGGAAGTCTTGAAGAGTACAATGAAGCATTGTCAAATGGAACAGTGGGTGCCATCTTTGATGAAACTCCTTATCTCAAGCTTTTCCTTTCCAAATGCCCTTCTTGCAAGATGACAGGACCAATCTACAGTACTGGTGGATTCGCGTTTGCATTCCCAAATAATTCTATCTTGGTCCCGAATTTCTCAGCTGCAATATTAAAAGTGACTCAAAATGTGACAGCATTTCATGAGATGAAGAAGAGCATATCCTTACCCGACACCATTGATAAATCCGAATACAAAAGTGATGTTGACATGCGAAGTTTGACGAAGGAAGACTTTGGAGGTCTTTTCCCAATAATATGGTCTGTTTTAGCTCTCTTCATGACCATTTTAATTCTTAAAGTTCCACCTATCCCTAACTGGTTGAGTACTATCTATGCCATCTCACTATTGCTCTCCGGTTGCATACGATCGATATTGGTTTTAATTTGGAGGTTCTTTAAGAGGAGGTGGAGATTAAAACAATAG 2583 0.4235 MAELQKSFKASLLSMSGLLLLVLLCLHITARASMAATNEQKKRLIPVGVILDLHSALGSMVNGSLALALEDYYSVHTDTATKIDLKVRNASHDNVLDAAKAAWDLVKKENVTAILGPENSEEARYVVDLGNTAYVPVIWFSPSGPSLLPPRTRFFITSDSTRSHCSQFEAIAAIIKAYNWQSVIPIYEEPQFGDDLIPCLYYALQDMDTQVPYISAIRQNFTDVQITKELDMIKDKRTYVFVAHMTVELWSRLVQHAKSAGLVDKGCAWILTQGLSSVLDPKALNIKVKGYMDGALGVRPSLADSNITKRVELGRRIVPQYGKSLSLYGLWAYDTITALANAVEKAGLANSDESRGDLRNETGPELLKAILSENFTGLSGNFNLSLGQLEPSQFVIYNVQAKRDIIFGNWSHKTGLVPDASVIVEWPGNAKERPPKLKIGVPKTHFTEFAGFTVEGQNVSATGFAVELFKQVVDVLPFPLPYEFVPLNSVSPSSYDDLLCQMKDKNVDVLIGDITVVASRKNCVDFTMPYLDSRLSIVVKVRSDSDSKNGGTFLEPFSRSIWLSLAVGVAGAAVTVSVIIFEIRKMNEGSNWHPFFLNPLLIYVSGVDILKSRTSKWVMVLVMFVLGIAMQVYTAYLSSILSERTMAKPSPWRDLQDIKRNNGSLGYQKDSWVKDLLIDQIKLKDHQLKALGSLEEYNEALSNGTVGAIFDETPYLKLFLSKCPSCKMTGPIYSTGGFAFAFPNNSILVPNFSAAILKVTQNVTAFHEMKKSISLPDTIDKSEYKSDVDMRSLTKEDFGGLFPIIWSVLALFMTILILKVPPIPNWLSTIYAISLLLSGCIRSILVLIWRFFKRRWRLKQ 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01826 860 Gene3D - 163 308 - -
Accr7g01826 860 SMART GluR_14 438 771 IPR001320 GO:0015276|GO:0016020
Accr7g01826 860 Gene3D - 309 388 - -
Accr7g01826 860 Pfam Bacterial extracellular solute-binding proteins, family 3 449 763 IPR001638 -
Accr7g01826 860 SUPERFAMILY Periplasmic binding protein-like I 44 435 IPR028082 -
Accr7g01826 860 Gene3D - 647 736 - -
Accr7g01826 860 Gene3D - 431 556 - -
Accr7g01826 860 Pfam Receptor family ligand binding region 63 400 IPR001828 -
Accr7g01826 860 SUPERFAMILY Periplasmic binding protein-like II 434 762 - -
Accr7g01826 860 Gene3D - 737 762 - -
Accr7g01826 860 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 47 817 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01826 Accr-Chr7 49374922 49380234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01826 45 818 Ion Channels AT2G29120 32.479 8.73e-119 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01826 K05387 - qsa:O6P43_022275 518.85