Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01825 ATGAGATCAATGGCAGAGTTGCAGAAAAGCTTCAAAGCTTCCCTGTTAAGTATGAGTGGCCTTCTTCTCTTAGTATTATTGTGCCTTCACATCACAGCAAGAGCTTCCATGGCGGCCACAAATGAGCAGAAGAAAAGACTAATTCCAGTAGGAGTCATTCTTGATCTGCATTCAGCACTTGGTTCCATGGTCAACGGCAGCCTCGCTCTCGCCCTCGAAGATTACTACTCCGTTCATACGGATACAGCCACCAAGATCGACCTTAAAGTCAGGAATGCTTCTCACGACAACGTCCTCGATGCTGCAAAAGCAGCTTGGGATCTAGTAAAAAAAGAAAATGTGACGGCAATCTTGGGACCTGAAAACTCTGAGGAAGCAAGGTACGTTGTAGATCTTGGTAACACAGCTTATGTACCTGTGATTTGGTTTTCTCCATCTGGTCCATCTCTATTGCCGCCTCGTACCCGGTTCTTCATCACCTCCGACTCCACCAGAAGCCATTGCTCTCAATTCGAAGCTATAGCTGCCATTATCAAAGCCTATAATTGGCAGTCTGTGATCCCCATTTATGAAGAACCTCAATTCGGCGATGACCTGATTCCATGTCTCTATTATGCCTTGCAAGACATGGACACTCAAGTGCCTTACATAAGTGCCATTCGTCAAAATTTCACGGATGTTCAAATCACCAAGGAGCTTGACATGATAAAAGACAAGCGAACATATGTGTTTGTCGCCCATATGACGGTGGAGCTTTGGTCAAGACTTGTGCAACATGCAAAATCTGCGGGGCTGGTTGATAAAGGATGCGCTTGGATACTTACGCAAGGCCTATCTTCTGTGCTAGATCCCAAAGCTTTAAATATAAAAGTGAAAGGCTACATGGATGGTGCTTTGGGTGTGAGGCCATCATTGGCTGATTCCAACATAACCAAGCGAGTTGAGTTAGGGAGAAGAATTGTGCCTCAGTACGGTAAAAGTCTGTCTCTATATGGCCTGTGGGCTTATGACACTATCACAGCATTGGCCAATGCAGTTGAGAAAGCCGGCTTAGCCAATTCTGATGAAAGCAGAGGTGATCTTCGCAACGAAACAGGCCCGGAACTTCTCAAAGCAATTCTGTCAGAGAATTTCACAGGTCTGTCAGGGAATTTCAATTTGAGTCTAGGACAATTAGAACCATCACAATTTGTAATATACAATGTGCAAGCCAAAAGAGACATAATCTTTGGAAATTGGAGCCATAAAACAGGACTTGTTCCAGATGCCAGCGTAATAGTTGAATGGCCGGGTAACGCAAAGGAGAGACCACCAAAGTTGAAAATTGGGGTCCCAAAAACGCATTTTACTGAATTTGCTGGTTTTACTGTAGAAGGACAGAATGTATCAGCTACTGGTTTTGCTGTTGAATTGTTTAAACAAGTGGTTGATGTTTTGCCATTTCCTTTACCTTATGAGTTTGTGCCCCTGAACAGCGTTAGTCCCTCGAGCTATGATGATCTTCTCTGCCAAATGAAAGACAAGAATGTTGATGTTTTAATTGGAGACATTACGGTTGTAGCAAGTCGCAAAAATTGTGTTGATTTCACAATGCCGTATCTAGATTCAAGACTGTCAATAGTGGTAAAGGTGAGGTCCGACTCCGACTCTAAAAATGGGGGGACCTTTCTCGAACCATTTAGTCGGTCAATTTGGTTAAGTCTTGCTGTGGGTGTTGCGGGTGCAGCTGTTACTGTGAGTGTAATTATATTTGAAATAAGAAAGATGAATGAAGGAAGCAATTGGCATCCCTTTTTTCTCAATCCCTTGCTTATTTACGTGAGTGGTGTTGACATTTTGAAAAGCAGGACGTCTAAATGGGTGATGGTATTGGTGATGTTTGTGTTGGGCATAGCAATGCAAGTTTACACAGCATATTTATCATCAATTTTATCAGAGAGGACAATGGCGAAGCCATCTCCATGGAGGGACTTGCAAGATATTAAAAGGAACAATGGGTCCTTGGGATATCAAAAGGACTCCTGGGTGAAAGATCTTCTGATTGATCAAATAAAATTGAAGGACCATCAGTTAAAGGCTCTAGGAAGTCTTGAAGAGTACAATGAAGCATTGTCAAATGGAACAGTGGGTGCCATCTTTGATGAAACTCCTTATCTCAAGCTTTTCCTTTCCAAATGCCCTTCTTGCAAGATGACAGGACCAATCTACAGTACTGGTGGATTCGCGTTTGCATTCCCAAATAATTCTATCTTGGTCCCGAATTTCTCAGCTGCAATATTAAAAGTGACTCAAAATGTGACAGCATTTCATGAGATGAAGAAGAGCATATCCTTACCCGACACCATTGATAAATCCGAATACAAAAGTGATGTTGACATGCGAAGTTTGACGAAGGAAGACTTTGGAGGTCTTTTCCCAATAATATGGTCTGTTTTAGCTCTCTTCATGACCATTTTAATTCTTAAAGTTCCACCTATCCCTAACTGGTTGAGTACTATCTATGCCATCTCACTATTGCTCTCCGGTTGCATACGATCGATATTGGTTTTAATTTGGAGGTTCTTTAAGAGGAGGTGGAGATTAAAACAATAG 2592 0.4232 MRSMAELQKSFKASLLSMSGLLLLVLLCLHITARASMAATNEQKKRLIPVGVILDLHSALGSMVNGSLALALEDYYSVHTDTATKIDLKVRNASHDNVLDAAKAAWDLVKKENVTAILGPENSEEARYVVDLGNTAYVPVIWFSPSGPSLLPPRTRFFITSDSTRSHCSQFEAIAAIIKAYNWQSVIPIYEEPQFGDDLIPCLYYALQDMDTQVPYISAIRQNFTDVQITKELDMIKDKRTYVFVAHMTVELWSRLVQHAKSAGLVDKGCAWILTQGLSSVLDPKALNIKVKGYMDGALGVRPSLADSNITKRVELGRRIVPQYGKSLSLYGLWAYDTITALANAVEKAGLANSDESRGDLRNETGPELLKAILSENFTGLSGNFNLSLGQLEPSQFVIYNVQAKRDIIFGNWSHKTGLVPDASVIVEWPGNAKERPPKLKIGVPKTHFTEFAGFTVEGQNVSATGFAVELFKQVVDVLPFPLPYEFVPLNSVSPSSYDDLLCQMKDKNVDVLIGDITVVASRKNCVDFTMPYLDSRLSIVVKVRSDSDSKNGGTFLEPFSRSIWLSLAVGVAGAAVTVSVIIFEIRKMNEGSNWHPFFLNPLLIYVSGVDILKSRTSKWVMVLVMFVLGIAMQVYTAYLSSILSERTMAKPSPWRDLQDIKRNNGSLGYQKDSWVKDLLIDQIKLKDHQLKALGSLEEYNEALSNGTVGAIFDETPYLKLFLSKCPSCKMTGPIYSTGGFAFAFPNNSILVPNFSAAILKVTQNVTAFHEMKKSISLPDTIDKSEYKSDVDMRSLTKEDFGGLFPIIWSVLALFMTILILKVPPIPNWLSTIYAISLLLSGCIRSILVLIWRFFKRRWRLKQ 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01825 863 Pfam Receptor family ligand binding region 66 403 IPR001828 -
Accr7g01825 863 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 50 820 IPR015683 -
Accr7g01825 863 SUPERFAMILY Periplasmic binding protein-like I 47 438 IPR028082 -
Accr7g01825 863 Gene3D - 312 391 - -
Accr7g01825 863 SUPERFAMILY Periplasmic binding protein-like II 437 765 - -
Accr7g01825 863 Pfam Bacterial extracellular solute-binding proteins, family 3 452 766 IPR001638 -
Accr7g01825 863 Gene3D - 434 559 - -
Accr7g01825 863 SMART GluR_14 441 774 IPR001320 GO:0015276|GO:0016020
Accr7g01825 863 Gene3D - 166 311 - -
Accr7g01825 863 Gene3D - 648 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01825 Accr-Chr7 49374922 49380243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01825 48 821 Ion Channels AT2G29120 32.479 6.14e-119 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01825 K05387 - qsa:O6P43_022275 518.85