Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01823 ATGGCAGGAATGCAGAAAAGGCGAAGAGAATCTCTCATATATGGGGGCTTATTGTTATGCCTAATTACCCTAACTCAGTCTGCAACTGTATCCGTACCAGTAGGAGTGATTCTGGATTCGGATTCCTCACTTGTCAACGCCACTCTCAACATCGCACTTCAACATTTCTATGAGGCACATCATTCATATGCAACCAGGCTCCAACTTTTTTTCAACACATCTAAAACCGATCTCGATGCAGCTTCTGCAGCTTGGTATCAAATATATCAGCAAAATGTGAGTGCAATCCTGGGACCTCAAAACTCAGAGCAAGCAAGGTATGTTAAAGAATACGGTGACTTTGATGAGGTACCTGTGATTTGGTTTTCTCCATCTGGTCCTTCTCTTATGCCACCTCGTACCCGATTCTTCATCCACTCCAACTTCACCAGAAGCCATTGCTCTCAGTTTGAAGCTATAGCTGCGATTATCAAAGCTTATAATTGGCAGTCTGTGATCCCCATTTATGAAGACCCTGAATTCGGCTATGACCTAATTCCTTGTCTCTCTTATGCCTTGCAAGACATGGACACTCGAACGCCTTACATAAGTGCTGTAATGTAA 603 0.4328 MAGMQKRRRESLIYGGLLLCLITLTQSATVSVPVGVILDSDSSLVNATLNIALQHFYEAHHSYATRLQLFFNTSKTDLDAASAAWYQIYQQNVSAILGPQNSEQARYVKEYGDFDEVPVIWFSPSGPSLMPPRTRFFIHSNFTRSHCSQFEAIAAIIKAYNWQSVIPIYEDPEFGYDLIPCLSYALQDMDTRTPYISAVM 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01823 200 PANTHER OS06G0188250 PROTEIN 25 199 - -
Accr7g01823 200 Gene3D - 65 144 - -
Accr7g01823 200 Gene3D - 145 173 - -
Accr7g01823 200 Pfam Receptor family ligand binding region 47 180 IPR001828 -
Accr7g01823 200 SUPERFAMILY Periplasmic binding protein-like I 32 191 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01823 Accr-Chr7 49261404 49264324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01823 18 199 Ion Channels AT5G11180 38.710 5.22e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01823 K05387 - pavi:110746978 139.813