Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01822 ATGGCAGAGTTGCAGAAAAGCTTCAAAGCTTCTTATCTCGTGAGTCTTCTTCTCTTCGTATTATTATGGCTTAGCATCACAGCAAGAGCATCCATGGCGGCCACAGAAATCCCAGTAGGAGTCATTCTTGATCTGAATTCAGAACTTGGTGAAATGGTTAATAACAGCCTCACCCTCGCCGTCGAAGATTACTATTCCGATAATAAACAAACAGCCACCATGATCCGCCTTATTGTCCGGAATGCTTCTCAGAACGACTTCGCCACCGCGGCAAGAGCAGCTCATGATCTAATGAAGAATGAAAAAGTGCATGCCATCTTGGGGCCCCAGAACTCAGAGCAAGCAAGGTATATAGTGAGACTTGGTGAGGAAGTATTCCAAAAACCAGTTATTTGGTTTCCCATAACTGGCCCATCTATTTTGCCTCCTCCATCGCCATCTTCCATCTACACCGGTCAAGGCCTTAATTGCTATCAGTTCCGAGCTATAGCTGCCATTATCAAAGCTCTTGGGTGGCAATCTATTGTTCCCATTTATGAAGAGACAGAATATGGCAGTCACCTTGTTCCATGCCTCACCAATGTGTTGAAAGAGATGGGCGTACAAATGGCTAACGTAACCGCCATTAATTCAAGTTCAAAAGATCTTGGAATTAACACCACTCTTGACACGTTAAACAACATGAGAACACATGTATTTCTTGTCCATATGAGCATGGATTTGGGAACAAAATTTATTTGGTCAGCACAGAAAAAAGAGATGATGGGTGAAGGATATGCTTGGATACTTACCCAAGAGCTATCTTCTTTGACAGATCCTCAAGTTCCGCTAGTCAGAAACTTGTATAATGGCTCATCTGTCCCAGTTGATAATTTTACTGATTTTGTTTCTTTGAAAAGATACATGCAAGGGGCATTGGGAGTGCGGCCAATGGATTCGAACAAAACAGATTTGCATAGGGCTAAAGAGAAGAATTTCACTGATCGTTTCCTTGGTACCCTACCTATCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTAAGGCAGTAGAGAAGGTAGAGAAGGCAGGCACAGACAACGGCCAAAAACTTCGCGATGAAATTAAGGCTACTACTTTCACAGGCGTGTCAGGGGTAAATTTTAACCTTAGTCAAGGACAACTAGAGCAATTGGAGTATGAAGTATACAATGTGATATCGGCAAGAGAAAGGATCATTGGATCTTGGAGCCCTAAAACTGGACTTGTTCAAGATTATAGTGACGGAGGTGGTGGTGGTGAGGCATCTGGTGGACGTGGATACCAACTAAAGTATCCACTGTGGCCGGGTGACACATTGGATAAACCACCAAAGTTGAGGATTGGAGTCCCAAGAACTAATTATTTTCCTGAATTTGTGGTTGTATATAATTCCAGTAAGCCTCGGGTTGATGGCTTTGCTTATAATGTGTTTTTGAGAGCTCTTGATGTTTTGCCATTTCCGTTAAATAATTTTGAATTTGTTCTCTTGCCGAACAATAGTGGAAGCGATAGCGCCACCTATGATGACATGCTCTGCACTCAAATGAAAGAGGAGGATCTTGATGCTATAATTGGGGACATCACAATTGTGGCAAGTCGGACAGATTGTGTTGATTTCACGTTGCCGTATTTAGATTCAAGTGTGGCAATGGTGGTTAGGATTAAGAATGCCTCCACTTCAGGGATCCTCTTCAAACCTTTCGATGGGTTACTGTGGGTAACTCTTGGTGGGATTTTTGTGGCTGCAACTATTGTCATACTTATATTAGAAAAATACAAAAACAAAACCAACGGAATACACAAAATCGACCAATTTCTCATCAACCCCTTCCTTGTTTACAAGATGGATGTTATGGAGAAATTTGCTAGCAGTGCTGCAGGATGGATGGTGATACTGACGTCATTCCTATTCATCTTAGTGGTGCAAGTTTACACGGCAAATTTAGCTTCAATTTTAACACAAGGGCAGGAGAAAGAGCCTTCATTTAAGGACGAAACCGAGATTATAAGAAGGAATCTATTGGTGGGATATCGAAGTGGGTCGATGTGGGTGAGAGAGCTTCTAACTGAACAACTAGGATTCAAGCCATCTCAGTTAAAGGCTTTAGGAAGTCCTGAAGAGTACAATGAAACATTGTCAAGGGGAACCAAAAATGGAGGAGTGGATGCTATTTTTGATGAAACTCCATATCTCATGCTCTTCCTCTCCAAATATAAGTCTAGCTTCATGATGACAGGACCAATCTACAAAACTGGTGGACTTGCCTTTGCATTCCCAAGGAAATCTGGTTTGGTCTCGCATTTCTCGACTGCAATCTTAAATGTGACTCAAGATGCGGAGCCATTTCGTTTGCTGATGGCTAGGAGCGCCTTACCAACCTCCATTGAAGATTTGGAATTTGAAGATGAAAGTGACATAGAGACGTCAAGTTTGAGCATATCTAACTTTGGAGGCCTTTACCCTGTCCTATTATTCGTTGTGGTTCTTTTTTTATGCCTTTCCATTCCATCAGTGATTAAAAGGTTGCCTGATCAATCAACAGTGATTGAATAG 2580 0.4209 MAELQKSFKASYLVSLLLFVLLWLSITARASMAATEIPVGVILDLNSELGEMVNNSLTLAVEDYYSDNKQTATMIRLIVRNASQNDFATAARAAHDLMKNEKVHAILGPQNSEQARYIVRLGEEVFQKPVIWFPITGPSILPPPSPSSIYTGQGLNCYQFRAIAAIIKALGWQSIVPIYEETEYGSHLVPCLTNVLKEMGVQMANVTAINSSSKDLGINTTLDTLNNMRTHVFLVHMSMDLGTKFIWSAQKKEMMGEGYAWILTQELSSLTDPQVPLVRNLYNGSSVPVDNFTDFVSLKRYMQGALGVRPMDSNKTDLHRAKEKNFTDRFLGTLPIYGWWAYHTIEALAKAVEKVEKAGTDNGQKLRDEIKATTFTGVSGVNFNLSQGQLEQLEYEVYNVISARERIIGSWSPKTGLVQDYSDGGGGGEASGGRGYQLKYPLWPGDTLDKPPKLRIGVPRTNYFPEFVVVYNSSKPRVDGFAYNVFLRALDVLPFPLNNFEFVLLPNNSGSDSATYDDMLCTQMKEEDLDAIIGDITIVASRTDCVDFTLPYLDSSVAMVVRIKNASTSGILFKPFDGLLWVTLGGIFVAATIVILILEKYKNKTNGIHKIDQFLINPFLVYKMDVMEKFASSAAGWMVILTSFLFILVVQVYTANLASILTQGQEKEPSFKDETEIIRRNLLVGYRSGSMWVRELLTEQLGFKPSQLKALGSPEEYNETLSRGTKNGGVDAIFDETPYLMLFLSKYKSSFMMTGPIYKTGGLAFAFPRKSGLVSHFSTAILNVTQDAEPFRLLMARSALPTSIEDLEFEDESDIETSSLSISNFGGLYPVLLFVVVLFLCLSIPSVIKRLPDQSTVIE 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01822 859 SMART GluR_14 455 797 IPR001320 GO:0015276|GO:0016020
Accr7g01822 859 Gene3D - 31 161 - -
Accr7g01822 859 SUPERFAMILY Periplasmic binding protein-like I 33 412 IPR028082 -
Accr7g01822 859 Pfam Receptor family ligand binding region 53 400 IPR001828 -
Accr7g01822 859 Gene3D - 450 572 - -
Accr7g01822 859 Gene3D - 162 350 - -
Accr7g01822 859 SUPERFAMILY Periplasmic binding protein-like II 449 788 - -
Accr7g01822 859 Gene3D - 573 694 - -
Accr7g01822 859 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 844 IPR015683 -
Accr7g01822 859 Pfam Bacterial extracellular solute-binding proteins, family 3 519 788 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01822 Accr-Chr7 49213107 49219247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01822 35 789 Ion Channels AT2G29120 33.499 1.65e-112 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01822 K05387 - jre:108998809 518.85