Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01821 ATGAAGGAGTTGCAGAGAGGCTTCAGAGCTTCTTGTCTGTTAAGTGTGAGTGTGGTGTCAGTGTTACTGTTATGGCTTAACATCACAGCAAGACCATCCATGGCGGCCACACAAACAGTACCAATAGGAGTTATTCTTGATCTTGGTCTGAATTCAGTACTTGGTGAAATGATTTACAATAGCCTCGCCTTGGCCATCGAGGAATACTATTCCGTTAATAACCGAACAGCCACCAAGATCGACCTTATAGTCAAGAATGTTTCTCGGGACGACATCTTCACCGCGGCTACAGCAGCTTCCTACTTAATGAGGACTAAGAAGGTGCATGCCATATTGGGGCCCCAAACTTCAGAGCAAGCAAGGTATATAGTGAAACTTGGTGAGAAATACCAAGTACCTGTTATTTGGTTCCCCATAACTGGTCCCTCTCTTTTGCTACCTCCATCTCCATCCTCCATCTACTCCGATGAAGGCCTTAATTGCTTTCAGTTCCGAGCTATAGCTGACATTATTAAAGCTGTTGGGTGGCAATCAATTGTCCCCATTTATGAAGAGACTGAATATGGCAGTCACCTTCTTCTATGCCTCTCCAATGTCTTGAAAGATATGGGCGTACAAATGGCTAACGTAACTGCCATTGCTTCAAAACTTGAAGAACCTCGAGTTATGTTTCTCAGAGAATTGTATTATCCCAACCAAGTCCAAGCTGGGTATTTTACTGATTACCTTTCTGTGAGAATGGATATGCAAGGTGCGTTGGGGGTGAGGCCAGTGGGTTTGAACAAAACAGCTGAGGAGCGTAAGAAGATAGTGAGTATTTTCTCAAAAAAGTTCAAAAGTGACCTGTCTATCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCAGTAGAGAAGCAAGGCGCTGAAAATAATGGCACAAAACTTGGCGAGGGAATACGGGCTACTAACTTCACAGGCGTTTCAGGGGTACATTTTAATTTAAGAAACGGACAACTAGATCAATCGGTGCTTGAAGTATACAATGTGATAGGAGATAGAGAAAGGATCATAGGATCTTGGAGCCCTAAAACTGGACTTTTTCAAAATCATGATAAAGAGGGTTTTGAGACATCTAGTGAATACCAACTAAAGGATCCACTGTGGCCGGGTGACACATTGGATAAACCACCAAAGTTGAGAATTGGAGTCCCAACAACAAATTCTTTTCCCGAATTTCTGAATGTTTATAATTCTACAAAGCTTCACTTTGATGGCTTGGCTATTAATGTGTTTTCAAAAGCTGTCGAAGTTTTGGCGTTTTCGTTGAATAATTATGAGTTTGTTCCCTTGCCGAACCAAAGTAGAAGCCATAACACCAGCTATGATGATATTCTCTGCAGACAAATGAAAGAGGAGGATCTTGATGCTATAATTGCAGACATCACAATTGTGGCAAGTCGCACAAAATGTGTTGATTTCACGTTGCCGTATTTAGATTCAAGTGTAGCAATGGTGGTTAGGGTTACAAAGACCTCCACGAGTAAGAGGATCCTCTTGAAACCTTTCAAATGGTCACTATGGTTAATTCTTGGTGCGATTTTTGTGGGTGCAACTATTATCATAAATGCATTAGAAATAATCAGAGCCGACGACGACTTGCGCTTGATCAACAACCCCTTCCTTGTTTACAAGATCGATGTTATGGACAATTTTAAAAGCGCTACTGCGAGGTGGATGGTGATACTGACATCATTCCTATTCATCTTAGTAGTGCAAGTTTACACGGCGAAATTAACTTCAATTTTAACACAAGGAACAATAAACGAGCCTTCATTTAAGAATGAAAATGAGATTAAAGGTGGCAATGTGCCCGTAGGATACAAAAAAGGATCATGGGTGAGAGGGCTTCTGATTGACCAAATAGGATTGAAGGATGAACAGTTAAAGAGTTTAGGAAGTTGTGAAGAGTACAATGAAGCATTGTCAAATGGCACAGTGGATGCTATTTTTGATGAAACTCCTTATCTCATCCTCTTCCTCTCCAGATATAGGTCCCGCTTTATGATGACAGGACCAATGTATCAAACTGGTGGATTTTCCTTTGCATTTCCCAAGAAATCTGGCTTCACCAAGCATTTCTCAACAGCAATCTTAAATGTGACTCAGGAAGTGGAGCCATATCGTGTGCTGATGAGCCAGAGCTCCTTACCCACCTCCATTGAAGATTTGGAATTTGAAGACCAAAATGATATAGAGATAGAGACGTCAAGTTTAAGTATATCTAACATTGGAGGCTTTTACCCAGTCTTAACATCCATTGTAGTTGCCTTTTTATTCGGCCTTTTCATTCCATCAGTTCCATCAGTGATTCTGAAGATTCTGAATCCATCAGTGATTCGTTGGTTTTGGCTTTTATGGTCAAGGGCACGTTTGAATTAA 2430 0.4119 MKELQRGFRASCLLSVSVVSVLLLWLNITARPSMAATQTVPIGVILDLGLNSVLGEMIYNSLALAIEEYYSVNNRTATKIDLIVKNVSRDDIFTAATAASYLMRTKKVHAILGPQTSEQARYIVKLGEKYQVPVIWFPITGPSLLLPPSPSSIYSDEGLNCFQFRAIADIIKAVGWQSIVPIYEETEYGSHLLLCLSNVLKDMGVQMANVTAIASKLEEPRVMFLRELYYPNQVQAGYFTDYLSVRMDMQGALGVRPVGLNKTAEERKKIVSIFSKKFKSDLSIYGWWAYHTIEALAMAVEKQGAENNGTKLGEGIRATNFTGVSGVHFNLRNGQLDQSVLEVYNVIGDRERIIGSWSPKTGLFQNHDKEGFETSSEYQLKDPLWPGDTLDKPPKLRIGVPTTNSFPEFLNVYNSTKLHFDGLAINVFSKAVEVLAFSLNNYEFVPLPNQSRSHNTSYDDILCRQMKEEDLDAIIADITIVASRTKCVDFTLPYLDSSVAMVVRVTKTSTSKRILLKPFKWSLWLILGAIFVGATIIINALEIIRADDDLRLINNPFLVYKIDVMDNFKSATARWMVILTSFLFILVVQVYTAKLTSILTQGTINEPSFKNENEIKGGNVPVGYKKGSWVRGLLIDQIGLKDEQLKSLGSCEEYNEALSNGTVDAIFDETPYLILFLSRYRSRFMMTGPMYQTGGFSFAFPKKSGFTKHFSTAILNVTQEVEPYRVLMSQSSLPTSIEDLEFEDQNDIEIETSSLSISNIGGFYPVLTSIVVAFLFGLFIPSVPSVILKILNPSVIRWFWLLWSRARLN 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01821 809 Gene3D - 166 231 - -
Accr7g01821 809 SUPERFAMILY Periplasmic binding protein-like I 32 387 IPR028082 -
Accr7g01821 809 SUPERFAMILY Periplasmic binding protein-like II 391 719 - -
Accr7g01821 809 Gene3D - 515 624 - -
Accr7g01821 809 Pfam Receptor family ligand binding region 60 215 IPR001828 -
Accr7g01821 809 Pfam Bacterial extracellular solute-binding proteins, family 3 464 720 IPR001638 -
Accr7g01821 809 SMART GluR_14 397 723 IPR001320 GO:0015276|GO:0016020
Accr7g01821 809 Gene3D - 34 165 - -
Accr7g01821 809 Gene3D - 392 514 - -
Accr7g01821 809 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 780 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01821 Accr-Chr7 49184319 49189783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01821 37 740 Ion Channels AT2G29120 30.566 6.63e-96 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01821 K05387 - qsu:111985481 450.284