Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01816 ATGCAGAGAAGGCAAAGAGATTGTCTCTTATTATTTGTGGGCTTAATATGCCTAATTACCATAACTGAATTATCTGCCACTGTAACCATACCAATAGGAGTGATCCTGGATTTGGATTCATCACTTGGTTCCACCGTTCGCGACTACATCAACATCGCACTCCAAAATTTCTATGACGAGCATAATTCATCTACAACCAGGCTCCAACCTCTTTTCAGGGATTCTAAGAACGATCTCCTCACTGCAGCTTCTGAAGCTTACGATCTAGTATACAAAGAAAATGTGAGTGCAATCCTGGGCCCTCAAAACTCGGAGCTAGCAAGGTATGTTGTTGACCTTGGTATTACGAGTGGTGTACCCGTGATATGGTTTCCTCCATCTGGTCCTTCTCTGTTGCCACCTCGTACCCGATTTTTCATCAACTCCAACTTCAGTAGAAGCCATTGCTCTCAGTTCGAAGCTATAGCAGCCATTATCGAAACTTATAATTGGCAGTCTGTGATCCCCATTTATGAAGAGCCTGAATTCGGAAATGACCTTATTCCATGTCTCACTTATGCCTTGCAAGACATGGACACTCGAGTGCCTTACATAAGTTCCATTCGTCAAAATTTCACGGATGCGGAAATCACCGAAGAGCTTGACAGGATAAAAGAACTGCGAACATATGTGTTTGTTGCCCATATGACTATGGAGCTTTGGTCAAGACTTTTGGAACCAGCAAAAAAGGCGGGGATGATGAGTGAAGGACACGCTTGGATGCTTACGCAAGGCCTATCTCCTTTGTTAGATCCCAAAGCTAAAGATACAAAAGAGAAAGGCTACATGGATGGTGCTTTGGGTGTGAGGCCTTTATTGGATGTTTCCTTAGAGACAACATTAATGGATGAGCACAACGTAAATCTCTCTCTTTATGGGCTGTGGGCTTATGACACTGCCAAAGCATTGGCCAATGCAGTACACAACTCCGGATTATTTGATTCTAATGAAAGCACAGTTGAACTTGGAAAAAAAACATCAGGCCCAGAACTTCTCAAAGCAATTCTGGAAACTGATTACGAAGGCGTGTCAGGGAATTTCAGTTTGAGGCAGGAACAACTGGAACCATCAGAGTTTGTAGTGTACAATATGAAAGGCCAAAGAGAAAATATCATCGGATATTGGAGACCTGAAACAGGACTTTTTCAAAATTACAGTGCAGATGGTAAACCAGATGGTAAATACAAACTAAGGGACCCGGCATGGCCGGGTAACACAACGGAGAGGCCACCAAAGTTGAAAGTTGGGGTCCCAACAAAAACACATTTTTCTGAATTTGTTCATCTTACGATTACGGAAGGACCTACTGGTTTTGCTGTTGAAGTGTTTAAAAAAGTGGTTGATGCTTTACCATTTCCTTTACCTTATGAGTTTGTGCCCGTGGACAACGATAATGGATACGATGATCTTCTCCGCAATAACAAGAATCTTGATGTTATAATTGGAGACATAACAATTACAGCGAATCGTGCAACTTATGTTGATTTCACAATGCCATATTTGGAATCAAGGGTGTCAATGGTGGTAAATGTGAGGCCCGACTCTGAAAATGGGTGGATCCTCTTCAAACCTTTTGATTGGACACTTTGGTTAATTCTTGGTGTGATATTTGTGGGTGCAACTGTTTTCATACTTATTTTGGAAAGAAATAGGAGGAGCGATCCTAAAAGCAAATTTGCACGCCTTTGTCGGAATCCCTTCCTTATTTACAAGAGTGATGTTGATTGTTTGAGAAGTGACTCGTCTAAATCGACGGTGTTAGTGGTCATGTTTGTGTTGGGCATAGCAATTCAAATTTATACAGCAAATTTAACTTCAGTTTTAACTGACATGACCACGGCAAAGCGTTCTCCATTGAAGGACGTGCAAGAGATTAGAAGGAAGCATGTGTCAGTAGGATATCAAAAAGATTCATGGGTGAAAGATCTTCTGACTACAAAAATAGGATTGAAGGACGACCAATTAAAAGCTTTAACAAGTGTTGAAGAGTACAATAAAGAATTGTCGAAAGGAGGTGTGGATGTTATTTTTGATGAAACTCCTTATCTCTCACTGTTGCTTTCCAAATGCTCTTCTTGCAAAATGACAGGACCAATCTACAAATCAGCTGGATTTGCCTTTGCATTCACCAATAGTTCTACCTTGGCATCAAATTTTTCAGCTACTATATTAAATTTGACTCAAAATGTGACGTTGTTTGGCGACATGAAGAGGAGCATAACCTTACCCCTCATCATTGACAAATCCAAAAGTGATGTTGAGATGCGAAGTTTGACAGCTGACGACTTTGGAATATTCCTTTTCCCGTTAGTGTACTCTATCTTAGGTTTAGTCTCCTGCATTTTAATTCTTGAAGTTCCAATAATCAAAAGCTGGTTGAATGCGAGAAAGGATTCACTTTGGAAGCAGCCTACGGTGCAATCGGAAGTGCAGTTACCAGGACATTAA 2487 0.4093 MQRRQRDCLLLFVGLICLITITELSATVTIPIGVILDLDSSLGSTVRDYINIALQNFYDEHNSSTTRLQPLFRDSKNDLLTAASEAYDLVYKENVSAILGPQNSELARYVVDLGITSGVPVIWFPPSGPSLLPPRTRFFINSNFSRSHCSQFEAIAAIIETYNWQSVIPIYEEPEFGNDLIPCLTYALQDMDTRVPYISSIRQNFTDAEITEELDRIKELRTYVFVAHMTMELWSRLLEPAKKAGMMSEGHAWMLTQGLSPLLDPKAKDTKEKGYMDGALGVRPLLDVSLETTLMDEHNVNLSLYGLWAYDTAKALANAVHNSGLFDSNESTVELGKKTSGPELLKAILETDYEGVSGNFSLRQEQLEPSEFVVYNMKGQRENIIGYWRPETGLFQNYSADGKPDGKYKLRDPAWPGNTTERPPKLKVGVPTKTHFSEFVHLTITEGPTGFAVEVFKKVVDALPFPLPYEFVPVDNDNGYDDLLRNNKNLDVIIGDITITANRATYVDFTMPYLESRVSMVVNVRPDSENGWILFKPFDWTLWLILGVIFVGATVFILILERNRRSDPKSKFARLCRNPFLIYKSDVDCLRSDSSKSTVLVVMFVLGIAIQIYTANLTSVLTDMTTAKRSPLKDVQEIRRKHVSVGYQKDSWVKDLLTTKIGLKDDQLKALTSVEEYNKELSKGGVDVIFDETPYLSLLLSKCSSCKMTGPIYKSAGFAFAFTNSSTLASNFSATILNLTQNVTLFGDMKRSITLPLIIDKSKSDVEMRSLTADDFGIFLFPLVYSILGLVSCILILEVPIIKSWLNARKDSLWKQPTVQSEVQLPGH 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01816 828 SUPERFAMILY Periplasmic binding protein-like II 422 742 - -
Accr7g01816 828 Pfam Receptor family ligand binding region 51 379 IPR001828 -
Accr7g01816 828 Gene3D - 148 313 - -
Accr7g01816 828 Gene3D - 420 530 - -
Accr7g01816 828 SMART GluR_14 425 748 IPR001320 GO:0015276|GO:0016020
Accr7g01816 828 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 797 IPR015683 -
Accr7g01816 828 Pfam Bacterial extracellular solute-binding proteins, family 3 445 744 IPR001638 -
Accr7g01816 828 SUPERFAMILY Periplasmic binding protein-like I 29 424 IPR028082 -
Accr7g01816 828 Gene3D - 531 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01816 Accr-Chr7 48869764 48876665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01816 9 810 Ion Channels AT5G11180 31.555 4.68e-126 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01816 K05387 - qsa:O6P43_022275 534.258