Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01807 ATGGATGGTACCTGTAGGAACAAGACATCGCGTAAGGGACGAAGAAGTGGGAGTGGCTCTGTAACAGACACTCTTGAGAAGTGGAAGAAGTACAACAGTGAGCTTGAGTTTGTCAAAAATGGAGCAAAGAAAGTGAGACACAGAGTGCCAGCGAAAGGCTCAAGAAAGGGATGCATGAGAGGCAAAGGTGGGCCTCAAAACTCAGATTGCAACTACAGAGGAGTGAGACAGAGGATTTGGGGCAAATGGGTGGCAGAAATTCGCGAACCTATTACTGGAAATCACAGTAACCTGGCAAACAAGAAACCAAATCGCTTATGGCTCGGCACTTTCTCTACTGCACTTGAAGCTGCTCTTGCTTATGATGAAGCAGCTAAAGCCATGTATGGTCCTTGTGCTCGCCTTAACTTTCCCGAGTTTAATATGGAAAGAGAAATAGTAGAAGAAGAAGAAGAACCCACATGCTCTAATGAGGAAACAGAGAAGAAACATGAGTTTGTTCTGGTGAAGACTGAAGAAGAAACAGAGGATTCTGGTGTCAATGAAAGTGAAGCTTCCTTTGGGAAGAAGCAGATGGAGGAAATGACTTGTGAGATTCTGCGATTTTGTTCAACAAATGAGGAATATAAAGCTTGTAAAGAGAGAAAATTTGAAGATGAGGAGCGTTTGAACAATTCTGGTGATGGGAACTCCATGTTTGAAGAAAAAGAAACTGATGAGTGGCAGAGTGGTCATTTGCCTCTGTATCTGAATAACATGAAGGAGGCAGACCAGGAAGTGGGTTATTGTGACTACAGTTTCTTGAGACCTGATTATGACTTTGGCTTATTGGAAGAGAAAAACTTACTTGGTGTATGGTTTCCACATAGAGGTTCCTAA 879 0.4278 MDGTCRNKTSRKGRRSGSGSVTDTLEKWKKYNSELEFVKNGAKKVRHRVPAKGSRKGCMRGKGGPQNSDCNYRGVRQRIWGKWVAEIREPITGNHSNLANKKPNRLWLGTFSTALEAALAYDEAAKAMYGPCARLNFPEFNMEREIVEEEEEPTCSNEETEKKHEFVLVKTEEETEDSGVNESEASFGKKQMEEMTCEILRFCSTNEEYKACKERKFEDEERLNNSGDGNSMFEEKETDEWQSGHLPLYLNNMKEADQEVGYCDYSFLRPDYDFGLLEEKNLLGVWFPHRGS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01807 292 Pfam AP2 domain 70 130 IPR001471 GO:0003700|GO:0006355
Accr7g01807 292 ProSiteProfiles AP2/ERF domain profile. 71 138 IPR001471 GO:0003700|GO:0006355
Accr7g01807 292 SMART rav1_2 71 144 IPR001471 GO:0003700|GO:0006355
Accr7g01807 292 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 239 - -
Accr7g01807 292 CDD AP2 70 139 IPR001471 GO:0003700|GO:0006355
Accr7g01807 292 Gene3D AP2/ERF domain 71 139 IPR036955 GO:0003700|GO:0006355
Accr7g01807 292 MobiDBLite consensus disorder prediction 1 23 - -
Accr7g01807 292 SUPERFAMILY DNA-binding domain 71 138 IPR016177 GO:0003677
Accr7g01807 292 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Accr7g01807 292 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Accr7g01807 292 FunFam Ethylene-responsive transcription factor 2 70 139 - -
Accr7g01807 292 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01807 Accr-Chr7 48758438 48759316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01807 9 173 AP2-EREBP Transcription Factor Family AT2G40340 46.111 9.54e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr7g01807 AP2 6.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01807 - - pcin:129300022 436.032