Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01806 ATGACGACTGAAATCCTTTGTGGGAACAAGACATCGCGTAAGGGACGAAGAAGTGGGAGTGGCTCTGTAACAGACACTCTTGAGAAGTGGAAGAAGTACAACAGTGAGCTTGAGTTTGTCAAAAATGGAGCAAAGAAAGTGAGACACAGAGTGCCAGCGAAAGGCTCAAGAAAGGGATGCATGAGAGGCAAAGGTGGGCCTCAAAACTCAGATTGCAACTACAGAGGAGTGAGACAGAGGATTTGGGGCAAATGGGTGGCAGAAATTCGCGAACCTATTACTGGAAATCACAGTAACCTGGCAAACAAGAAACCAAATCGCTTATGGCTCGGCACTTTCTCTACTGCACTTGAAGCTGCTCTTGCTTATGATGAAGCAGCTAAAGCCATGTATGGTCCTTGTGCTCGCCTTAACTTTCCCGAGTTTAATATGGAAAGAGAAATAGTAGAAGAAGAAGAAGAACCCACATGCTCTAATGAGGAAACAGAGAAGAAACATGAGTTTGTTCTGGTGAAGACTGAAGAAGAAACAGAGGATTCTGGTGTCAATGAAAGTGAAGCTTCCTTTGGGAAGAAGCAGATGGAGGAAATGACTTGTGAGATTCTGCGATTTTGTTCAACAAATGAGGAATATAAAGCTTGTAAAGAGAGAAAATTTGAAGATGAGGAGCGTTTGAACAATTCTGGTGATGGGAACTCCATGTTTGAAGAAAAAGAAACTGATGAGTGGCAGAGTGGTCATTTGCCTCTGTATCTGAATAACATGAAGGAGGCAGACCAGGAAGTGGGTTATTGTGACTACAGTTTCTTGAGACCTGATTATGACTTTGGCTTATTGGAAGAGAAAAACTTACTTGGTGTATGGTTTCCACATAGAGGTTCCTAA 885 0.4271 MTTEILCGNKTSRKGRRSGSGSVTDTLEKWKKYNSELEFVKNGAKKVRHRVPAKGSRKGCMRGKGGPQNSDCNYRGVRQRIWGKWVAEIREPITGNHSNLANKKPNRLWLGTFSTALEAALAYDEAAKAMYGPCARLNFPEFNMEREIVEEEEEPTCSNEETEKKHEFVLVKTEEETEDSGVNESEASFGKKQMEEMTCEILRFCSTNEEYKACKERKFEDEERLNNSGDGNSMFEEKETDEWQSGHLPLYLNNMKEADQEVGYCDYSFLRPDYDFGLLEEKNLLGVWFPHRGS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01806 294 SUPERFAMILY DNA-binding domain 73 140 IPR016177 GO:0003677
Accr7g01806 294 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Accr7g01806 294 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Accr7g01806 294 CDD AP2 72 141 IPR001471 GO:0003700|GO:0006355
Accr7g01806 294 ProSiteProfiles AP2/ERF domain profile. 73 140 IPR001471 GO:0003700|GO:0006355
Accr7g01806 294 Gene3D AP2/ERF domain 73 141 IPR036955 GO:0003700|GO:0006355
Accr7g01806 294 FunFam Ethylene-responsive transcription factor 2 72 141 - -
Accr7g01806 294 Pfam AP2 domain 72 132 IPR001471 GO:0003700|GO:0006355
Accr7g01806 294 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 10 241 - -
Accr7g01806 294 SMART rav1_2 73 146 IPR001471 GO:0003700|GO:0006355
Accr7g01806 294 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01806 Accr-Chr7 48758438 48760036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01806 8 175 AP2-EREBP Transcription Factor Family AT2G40340 45.902 4.93e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr7g01806 AP2 6.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01806 - - pcin:129300022 442.195