LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr7g01805	ATGAACACACTTTGTTGCTTCTTCTTCTTTTTCTTGTTACTGTTCCTTTTTCCTCTTCTCTCTTTCTCTCTCTCATCCGATGGCCTTTCCCTTTTGTCTCTTAAATCCGCCATTGATCAGCCTCCTGGAGCCTCCGCTTTTCCTGATTGGAATGACGGTGATGCGACTCCTTGCCAGTGGTCTGGTATCTCCTGCATGAACGTCTCCGGTTCCCCCGAGCCTCGCGTTGTTGGAATCACGCTTTCCGGTAAGAATCTCCGGGGATATATTCCTTCTGAGCTCGGAAGCTTGGAATATCTTCGCAGGCTTAATTTGCATAGCAACAATTTCTATGGTTTTATTCCTGTTCAGCTGTTCAATGCCACTTCACTTCACAGTCTTTTTCTCTATGGTAACAACCTCTCCGGTCCTTTGCCTCCTTCGATCTGTAACATCCCGCGTCTTCAAAACGTCGATCTCTCCAATAATTCAATCTCCGGTAATATTCCTGGGGAACTCAAGAATTGCAAGCAGTTACAGAGACTGATTCTCGCCCGGAACAAGTTTTCCGGTGAGATACCTAAAGGTGTGTGGTCGGAATTGGATAATTTGGTTCAATTGGACCTCTCCGCGAACGAGCTTGATGGGCCGATTCCAGACGATATTGGCCAATTGAAGTCTCTCTCGGGTACGCTCAACCTATCTTTTAATCACTTGTCTGGTAAAATACCGAAATCGCTGGGGAATTTGCCAGTTGCAGTGAGCTTTGATCTTCGGAATAACAATCTAAGCGGCGAGGTACCCCAAACGGGTTCGTTCGCTAATCAGGGTCCTACCGCATTTCTGAACAATCCACAACTATGTGGATTTCCTCTCCAGAAATCTTGCGGCAATTCGAACCAGGGCTCTTCGGGGAATCCAAGTTCATCTCGAGAGTCCGATAACCATAATGGCCTGAGTCCTGGTTTGATCATACTAATTTCAGCGGCTGACGCAGCTGCGGTTGCGTTAATTGGTCTTGTAGTTGTGTACATTTATTGGAAGAAGAAGGACAATTCCAATGGATGTAGCTGCACAGGGAAGAGCAAGTTTGGCGGGAATGAGAAAGGGCATATTTGTTCCTTACCATGTATCAATGGTCTAAAAAGTGATGACTCTGAAATAGAGGAACCTGAGAAGGTAGAGGAAAGCAGAGGGGAAGGTGATTTGGTGGCCATTGACAAGGGTTTTAACTTCGAGCTAGATGAACTTCTTCGTGCTTCAGCTTATGTATTGGGAAAGAGTGGATTAGGGATTGTGTACAAAGTGGTTCTGGGAAATGGTGTACCTGTAGCTGTTAGAAGACTCGGAGAGGGTGGTGAACAGAGGTACAAGGAGTTTGCGGCTGAGGTTCAGGCCATTGGGAAAGTGAAACACCCCAACATTGTGAGGTTGAAAGCTTATTATTGGGCTCCAGATGAAAAGCTTCTGATCAGTGATTTTATCTCCAATGGCAATCTGGCCACTGCTCTTCGAGGCAGAAATGGTCAGCCATCTCCGAATCTTTCATGGTCAACCAGGCTAAGAATTGCCAAAGGAACAGCTAGGGGTTTGGCCTATCTCCATGAATGCAGTCCAAGAAAGTTCGTTCATGGCGACATAAAACCCTCCAACATTCTACTTGACAACGACTTTCACCCTTACATCTCTGACTTCGGCCTCAACCGCCTCATCACCATCACTGGAAACAACCCTTCCTCTGGCGGCTTCATGGGCGGAGCTATTCCATATATGAAACCATCTCAAACGGAGAAAACCAACAATTACAAGGCCCCTGAAGCTAGAGTCCCTGGCTACAAACCAACCCAGAAATGGGACGTCTATTCATTCGGAGTTGTATTGCTTGAACTCCTCACCGGGAAATCTCCGGAGTCATCTCCGACAACATCAACTTCTGTGGAAGTCCCTGACTTAGTGAGGTGGGTGAAGAAAGGGTTTGAAGAAGAAAGTCCATTATCAGAAATGGTTGATCCATCACTGCTCCAAGAAGTTCATGCCAAGAAAGAGGTTCTAGCTGTGTTTCATGTAGCACTAGCTTGCACTGATAGTGACCCCGAGGTTCGACCTAGAATAAAATCTGTCTCTGAAAGTCTTGAAAGGATCGGAACATGA	2130	0.4629	MNTLCCFFFFFLLLFLFPLLSFSLSSDGLSLLSLKSAIDQPPGASAFPDWNDGDATPCQWSGISCMNVSGSPEPRVVGITLSGKNLRGYIPSELGSLEYLRRLNLHSNNFYGFIPVQLFNATSLHSLFLYGNNLSGPLPPSICNIPRLQNVDLSNNSISGNIPGELKNCKQLQRLILARNKFSGEIPKGVWSELDNLVQLDLSANELDGPIPDDIGQLKSLSGTLNLSFNHLSGKIPKSLGNLPVAVSFDLRNNNLSGEVPQTGSFANQGPTAFLNNPQLCGFPLQKSCGNSNQGSSGNPSSSRESDNHNGLSPGLIILISAADAAAVALIGLVVVYIYWKKKDNSNGCSCTGKSKFGGNEKGHICSLPCINGLKSDDSEIEEPEKVEESRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVRLKAYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFHPYISDFGLNRLITITGNNPSSGGFMGGAIPYMKPSQTEKTNNYKAPEARVPGYKPTQKWDVYSFGVVLLELLTGKSPESSPTTSTSVEVPDLVRWVKKGFEEESPLSEMVDPSLLQEVHAKKEVLAVFHVALACTDSDPEVRPRIKSVSESLERIGT	709

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr7g01805	709	SUPERFAMILY	L domain-like	25	286	-	-
	Accr7g01805	709	Pfam	Leucine rich repeat	146	207	IPR001611	GO:0005515
	Accr7g01805	709	Gene3D	Transferase(Phosphotransferase) domain 1	488	709	-	-
	Accr7g01805	709	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	535	547	IPR008271	GO:0004672\|GO:0006468
	Accr7g01805	709	Gene3D	Ribonuclease Inhibitor	190	290	IPR032675	-
	Accr7g01805	709	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	169	707	IPR046959	-
	Accr7g01805	709	FunFam	Os07g0541700 protein	493	574	-	-
	Accr7g01805	709	Pfam	Protein kinase domain	417	643	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr7g01805	709	Gene3D	Phosphorylase Kinase; domain 1	400	487	-	-
	Accr7g01805	709	Pfam	Leucine rich repeat N-terminal domain	25	65	IPR013210	-
	Accr7g01805	709	SUPERFAMILY	Protein kinase-like (PK-like)	417	704	IPR011009	-
	Accr7g01805	709	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	24	192	-	-
	Accr7g01805	709	FunFam	Leucine-rich repeat receptor-like protein kinase	395	487	-	-
	Accr7g01805	709	Gene3D	Ribonuclease Inhibitor	25	189	IPR032675	-
	Accr7g01805	709	FunFam	Leucine-rich repeat receptor-like protein kinase	196	291	-	-
	Accr7g01805	709	CDD	STKc_IRAK	418	707	-	-
	Accr7g01805	709	SMART	serkin_6	416	707	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr7g01805	709	ProSiteProfiles	Protein kinase domain profile.	412	707	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr7g01805	Accr-Chr7	48752673	48757248	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr7g01805	21	707	Receptor kinase-like Gene Family	AT1G67510	71.449	0.0	1000

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Accr7g01805		Pkinase	2e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr7g01805	-		-	qsa:O6P43_023877	1129.39