Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01790 ATGGGGATTTGTTGTACTAAAAATGGTCCTCCTCAATATCCACCTGAAAATGAGGTGAATGAGAAGATAGAATTTGAGAATGGAAAGGACGAAATTTCCATTTCCACATATAGTGGAGGTGAAGGGCGAGTCAGGTCAAGAGGACGCTCTAGGCTTATTTCAATGTACAGCCAGCAGGGAAGAAAAGGAGTCAACCAAGATGCAATGACAGTTCGTGAGGACTTCAATGGAGAGAAAGATCTGATATTTTGTGGTGTGTTCGATGGTCATGGTCCTTTTGGGCACGTGGTTGCTCGATATATCAGCAAACAGTTACCTTCAAAGCTTTCTGCAGCAATTAAAATTTCACAGCATAAGACCTACTTGTATAATGCTGCTGCAGAAGGTGAATATCACCAAACCTTGTCCCTTGCTTCATGGGAGAACACCTTCTTGAAATCCTTCAGTGAGATGGATCACGCCATTGCTCGGGACATCAACACCGACAGTTTTTACAGCGGTAGCACTGCTGTAACTCTGATCAAACAGAGTGGCCATCTGATAATTGGCAATTTGGGCGACTCTCGTGCAGTGCTTTGCACAAGAGGAGCTAGAGATCAACTCATTCCTGTTCAACTTACTGTTGACTTGAAACCAGATATTCCAAGTGAAGCTGAAAGAATCCGTAGCTGTGAAGGCAGAGTTTTTGCTGAAGAAGAAGAACCTGATGTGTACAGAATGTGGATGCCTGATGAAGACTGCCCTGGATTGGCTATGTCAAGATCCTTTGGGGACTTCTGCTTAAAAGATTATGGCCTCATATCGGCTCCCGATGTCTTCTATCGAAGATTAACCAAGCAGGATGAATTTGTGGTTCTGGCAACTGATGGGGTTTGGGATGCACTGACAAATGAAGAAGTCATAGAAATAGTAGCTTCAGCACCAAGGAGGTCAAGAGCAGCGAGATTGTTGGTAAAGAGAGCTGTGCAGGCATGGGATTACAAATTCCCTGGAGCCATAGTTGATGATTGTGCCGCCATATGTTTGTTTCTGAAGCCCCAATCGGATTTAACCAAATATGGGGAAAATAGGCTCAATAGGAAGAATTACTTTGAACCCGCAAGAAATGAATACACCACAAGCTTAGATAGCTCAGGATCCAAAGATGAATGGGTTGCTATTAAAGGGTTATCCAGAGCGAACACTATGTCCAAATTTACTGGGCTCATCAGGGATGTTAGCAGGAGGCGTCCATCTCAGTTTCTTGACGGTGCCCAATTTTACTAG 1266 0.4392 MGICCTKNGPPQYPPENEVNEKIEFENGKDEISISTYSGGEGRVRSRGRSRLISMYSQQGRKGVNQDAMTVREDFNGEKDLIFCGVFDGHGPFGHVVARYISKQLPSKLSAAIKISQHKTYLYNAAAEGEYHQTLSLASWENTFLKSFSEMDHAIARDINTDSFYSGSTAVTLIKQSGHLIIGNLGDSRAVLCTRGARDQLIPVQLTVDLKPDIPSEAERIRSCEGRVFAEEEEPDVYRMWMPDEDCPGLAMSRSFGDFCLKDYGLISAPDVFYRRLTKQDEFVVLATDGVWDALTNEEVIEIVASAPRRSRAARLLVKRAVQAWDYKFPGAIVDDCAAICLFLKPQSDLTKYGENRLNRKNYFEPARNEYTTSLDSSGSKDEWVAIKGLSRANTMSKFTGLIRDVSRRRPSQFLDGAQFY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01790 421 Pfam Protein phosphatase 2C 58 322 IPR001932 -
Accr7g01790 421 CDD PP2Cc 53 344 IPR001932 -
Accr7g01790 421 SUPERFAMILY PP2C-like 48 346 IPR036457 -
Accr7g01790 421 ProSiteProfiles PPM-type phosphatase domain profile. 52 344 IPR001932 -
Accr7g01790 421 PANTHER PROTEIN PHOSPHATASE 53 342 IPR015655 GO:0004722|GO:0006470
Accr7g01790 421 SMART PP2C_4 43 342 IPR001932 -
Accr7g01790 421 Gene3D - 44 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01790 Accr-Chr7 48604623 48607361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01790 1 344 PP2C-type Phosphatase Gene Family AT5G01700 51.453 6.44e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01790 - - gmx:100783603 483.411