Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01736 ATGGCGATTCCTCCTCAAATCTTCCCTCCTCGTAAACGACGGCCATCGGCGGCGTCGTTTATCTCCCCCAAACTCACAGAACCTGACCTCCTTCACTCTCTGCTTCACCTCACCCATGAGATTTCCTCTCTCAAACCCATCCAATTCCTTCTCAAACGCAATTCCTATTCCATAATTCGCAAGACCAATCTTCTCTCTGTTCTCTTCGAAGAGTTGATTAGAACTTCCATTCCTCTTTCCTCCCAATCTCTCATTCTGTGTTTCGAAGAAATGTACATAGTTCTTCAGAGGATCAAGACCTTGATCGAAGATTGCTCCAACGGGAGCAAGATGGCGATGTTGATGCAGAACGAATCAATTGCTGATAGTTTTCACAAACTCACGGCGGATTTATCGACGCTTCTGGATATCTTCCCGGTGACGGAGCTTGAATTAAGCGACGACGTGCGAGAGCTTGTGATCCTGATCAGAAAACAATGCATTGAATCCAAGCCTTTTGTGGATCTCAAGGACAACGAGCTCAGGCATGCGGTTGTCACGATGCTTGATCGTATTAAGCGAGAGATCGTCCCCAATCATTTGAAGCTTGTTGACATCTTCGAGAGGTTGGAAATTCGAGATTCTTCGAGTTGCAGAGCGGAGATTGAGAGTTTAGAGGAGGAAATTCAGAATCGAAACGATGAGCAATCCAAATCTGAGCTCGTCGCTTTGATCGGACTCGTCCGATACGCGAAATGCGTTCTATTCGGAGCTTCCACGGCGTCTTCTTCTTCTTCCTCCTCCGATGATGATGCAAAGAGGCGGAAACAGCCGTCGGATGTCGCTGTCCCGGCGGATTTCAGGTGCCCGATCACTCTCGACCTAATGCGCGATCCTGTTGTCGTGGCAACAGGACAGACGTACGATCGTGAGTCCATCCAACTGTGGCTCGAATCGGGGCATAACACGTGTCCCAAGACTGGTCAAACTCTGGCCCACACGGACCTCATCCCAAACCGTGCATTGCAGAATCTTATAGCGATGTGGTGCCGCGAGCAAAAGATACTGTTTGAAACCGTGGGCAGTAATGACAAACCTCACGGCGTTATCATCAACAAAGCCGCTTTAGAAGCTACTAGAATGACGGCGTCATTCTTAGTCAACAAGTTGTCTCTTTCTCCGTCCATGGAAGCCGCAAATGCCGTCGTTTATGAGCTCCGTGTTCTCGCTAAGACAGACTCTGATAGCCGAGCCTGCATAGCCGAAGCCGGAGCCATCCCTCTCTTAATTAGCTACTTGAGCTTCAATGTTGGCTCACAGAATCCAGACCTACAAGTTAACGCCGTCACGACTATCCTCAACCTTTCCATCCTCGAGGCGAACAAAACGAGGATAATGGAGACTGACGGAGCAATAAACGGCGTCATCGAGGTCCTTCGCTCAGGAGCCACGTGGGAGGCGAAGGCCAACGCAGCCGCCACAATATTTAGCTTATCTGGCATTCACTCGTATAGAAGAAGACTGGGGAGGAAGACACGAGTCACTCGGGGGTTGATTGACTTGGCAAGGTGTGGGCCCACAGGTGCCAGGAGGGACGCTCTGGTGGCAATTTTGACCCTGGCGGCGGACAGAGAGACGGTGGCGAGGTTGGTGGAAGCTGGGGTTGTGGAGATGACGGCGGAAGTTATGGACGGGTTACCGGAAGAGGCGGTGACGATTCTTGAGATGGTTGTGAAGCGGGGAGGGTTGATGGCCGTTGCTGCTGCGTTCAGTAGCATTAAGAAATTGGCAGTTATATTGAGGGAAGGTTCTGATAGGGCCAGAGAGAGTGCGGCGGCGACGCTTGCCACAATGTGTCGTAAAGGTGGGTCGGATATAGTGGCGGACTTGGCCTCCTTGCCGGGAATTGAAAGAGTGATATGGGAATTGATGGCCATTGGGACGGTAAGAGGGAAAAGAAAAGCCGCTACGTTGTTGAGGATTCTCCGGCGATGGGCAGCCGGTTTGGACAGTGCAGGGTTAACGGAAGGATTTTCAACGGCTCTCACATCGTCAACAACGATGGTTTCAACTCAATAG 2058 0.5083 MAIPPQIFPPRKRRPSAASFISPKLTEPDLLHSLLHLTHEISSLKPIQFLLKRNSYSIIRKTNLLSVLFEELIRTSIPLSSQSLILCFEEMYIVLQRIKTLIEDCSNGSKMAMLMQNESIADSFHKLTADLSTLLDIFPVTELELSDDVRELVILIRKQCIESKPFVDLKDNELRHAVVTMLDRIKREIVPNHLKLVDIFERLEIRDSSSCRAEIESLEEEIQNRNDEQSKSELVALIGLVRYAKCVLFGASTASSSSSSSDDDAKRRKQPSDVAVPADFRCPITLDLMRDPVVVATGQTYDRESIQLWLESGHNTCPKTGQTLAHTDLIPNRALQNLIAMWCREQKILFETVGSNDKPHGVIINKAALEATRMTASFLVNKLSLSPSMEAANAVVYELRVLAKTDSDSRACIAEAGAIPLLISYLSFNVGSQNPDLQVNAVTTILNLSILEANKTRIMETDGAINGVIEVLRSGATWEAKANAAATIFSLSGIHSYRRRLGRKTRVTRGLIDLARCGPTGARRDALVAILTLAADRETVARLVEAGVVEMTAEVMDGLPEEAVTILEMVVKRGGLMAVAAAFSSIKKLAVILREGSDRARESAAATLATMCRKGGSDIVADLASLPGIERVIWELMAIGTVRGKRKAATLLRILRRWAAGLDSAGLTEGFSTALTSSTTMVSTQ 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01736 685 SMART arm_5 406 450 IPR000225 GO:0005515
Accr7g01736 685 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 352 IPR013083 -
Accr7g01736 685 Pfam Armadillo/beta-catenin-like repeat 407 449 IPR000225 GO:0005515
Accr7g01736 685 Gene3D - 36 141 IPR036537 GO:0007166
Accr7g01736 685 Gene3D - 522 660 IPR011989 -
Accr7g01736 685 SUPERFAMILY RING/U-box 274 349 - -
Accr7g01736 685 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 417 463 IPR000225 GO:0005515
Accr7g01736 685 MobiDBLite consensus disorder prediction 253 272 - -
Accr7g01736 685 FunFam RING-type E3 ubiquitin transferase 272 349 - -
Accr7g01736 685 FunFam RING-type E3 ubiquitin transferase 362 550 - -
Accr7g01736 685 ProSiteProfiles U-box domain profile. 275 349 IPR003613 GO:0004842|GO:0016567
Accr7g01736 685 PANTHER U BOX DOMAIN-CONTAINING 46 656 - -
Accr7g01736 685 SMART Ubox_2 279 342 IPR003613 GO:0004842|GO:0016567
Accr7g01736 685 Pfam U-box domain 276 347 IPR003613 GO:0004842|GO:0016567
Accr7g01736 685 SUPERFAMILY ARM repeat 378 655 IPR016024 -
Accr7g01736 685 Gene3D - 367 519 IPR011989 -
Accr7g01736 685 Coils Coil 208 235 - -
Accr7g01736 685 CDD MLKL_NTD 52 141 - -
Accr7g01736 685 CDD RING-Ubox_PUB 277 329 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01736 Accr-Chr7 47494446 47496503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01736 9 661 U-box Gene Family AT5G01830 59.209 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01736 - - qsa:O6P43_026334 949.503