Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01735 ATGCCCATGCCTTCATCATTTATTGAAAACCTCACGAGTCCTCTTTCAGACGCTCAAAAAAGAATAATCCATCCTTATTTCAATTCTTTGCTTCTTCCTCCTTCATCGTTTTCTCCTCCGTTCATGGCGATTCCTCCTCAAATCTTCCCTCCTCGTAAACGACGGCCATCGGCGGCGTCGTTTATCTCCCCCAAACTCACAGAACCTGACCTCCTTCACTCTCTGCTTCACCTCACCCATGAGATTTCCTCTCTCAAACCCATCCAATTCCTTCTCAAACGCAATTCCTATTCCATAATTCGCAAGACCAATCTTCTCTCTGTTCTCTTCGAAGAGTTGATTAGAACTTCCATTCCTCTTTCCTCCCAATCTCTCATTCTGTGTTTCGAAGAAATGTACATAGTTCTTCAGAGGATCAAGACCTTGATCGAAGATTGCTCCAACGGGAGCAAGATGGCGATGTTGATGCAGAACGAATCAATTGCTGATAGTTTTCACAAACTCACGGCGGATTTATCGACGCTTCTGGATATCTTCCCGGTGACGGAGCTTGAATTAAGCGACGACGTGCGAGAGCTTGTGATCCTGATCAGAAAACAATGCATTGAATCCAAGCCTTTTGTGGATCTCAAGGACAACGAGCTCAGGCATGCGGTTGTCACGATGCTTGATCGTATTAAGCGAGAGATCGTCCCCAATCATTTGAAGCTTGTTGACATCTTCGAGAGGTTGGAAATTCGAGATTCTTCGAGTTGCAGAGCGGAGATTGAGAGTTTAGAGGAGGAAATTCAGAATCGAAACGATGAGCAATCCAAATCTGAGCTCGTCGCTTTGATCGGACTCGTCCGATACGCGAAATGCGTTCTATTCGGAGCTTCCACGGCGTCTTCTTCTTCTTCCTCCTCCGATGATGATGCAAAGAGGCGGAAACAGCCGTCGGATGTCGCTGTCCCGGCGGATTTCAGGTGCCCGATCACTCTCGACCTAATGCGCGATCCTGTTGTCGTGGCAACAGGACAGACGTACGATCGTGAGTCCATCCAACTGTGGCTCGAATCGGGGCATAACACGTGTCCCAAGACTGGTCAAACTCTGGCCCACACGGACCTCATCCCAAACCGTGCATTGCAGAATCTTATAGCGATGTGGTGCCGCGAGCAAAAGATACTGTTTGAAACCGTGGGCAGTAATGACAAACCTCACGGCGTTATCATCAACAAAGCCGCTTTAGAAGCTACTAGAATGACGGCGTCATTCTTAGTCAACAAGTTGTCTCTTTCTCCGTCCATGGAAGCCGCAAATGCCGTCGTTTATGAGCTCCGTGTTCTCGCTAAGACAGACTCTGATAGCCGAGCCTGCATAGCCGAAGCCGGAGCCATCCCTCTCTTAATTAGCTACTTGAGCTTCAATGTTGGCTCACAGAATCCAGACCTACAAGTTAACGCCGTCACGACTATCCTCAACCTTTCCATCCTCGAGGCGAACAAAACGAGGATAATGGAGACTGACGGAGCAATAAACGGCGTCATCGAGGTCCTTCGCTCAGGAGCCACGTGGGAGGCGAAGGCCAACGCAGCCGCCACAATATTTAGCTTATCTGGCATTCACTCGTATAGAAGAAGACTGGGGAGGAAGACACGAGTCACTCGGGGGTTGATTGACTTGGCAAGGTGTGGGCCCACAGGTGCCAGGAGGGACGCTCTGGTGGCAATTTTGACCCTGGCGGCGGACAGAGAGACGGTGGCGAGGTTGGTGGAAGCTGGGGTTGTGGAGATGACGGCGGAAGTTATGGACGGGTTACCGGAAGAGGCGGTGACGATTCTTGAGATGGTTGTGAAGCGGGGAGGGTTGATGGCCGTTGCTGCTGCGTTCAGTAGCATTAAGAAATTGGCAGTTATATTGAGGGAAGGTTCTGATAGGGCCAGAGAGAGTGCGGCGGCGACGCTTGCCACAATGTGTCGTAAAGGTGGGTCGGATATAGTGGCGGACTTGGCCTCCTTGCCGGGAATTGAAAGAGTGATATGGGAATTGATGGCCATTGGGACGGTAAGAGGGAAAAGAAAAGCCGCTACGTTGTTGAGGATTCTCCGGCGATGGGCAGCCGGTTTGGACAGTGCAGGGTTAACGGAAGGATTTTCAACGGCTCTCACATCGTCAACAACGATGGTTTCAACTCAATAG 2181 0.5021 MPMPSSFIENLTSPLSDAQKRIIHPYFNSLLLPPSSFSPPFMAIPPQIFPPRKRRPSAASFISPKLTEPDLLHSLLHLTHEISSLKPIQFLLKRNSYSIIRKTNLLSVLFEELIRTSIPLSSQSLILCFEEMYIVLQRIKTLIEDCSNGSKMAMLMQNESIADSFHKLTADLSTLLDIFPVTELELSDDVRELVILIRKQCIESKPFVDLKDNELRHAVVTMLDRIKREIVPNHLKLVDIFERLEIRDSSSCRAEIESLEEEIQNRNDEQSKSELVALIGLVRYAKCVLFGASTASSSSSSSDDDAKRRKQPSDVAVPADFRCPITLDLMRDPVVVATGQTYDRESIQLWLESGHNTCPKTGQTLAHTDLIPNRALQNLIAMWCREQKILFETVGSNDKPHGVIINKAALEATRMTASFLVNKLSLSPSMEAANAVVYELRVLAKTDSDSRACIAEAGAIPLLISYLSFNVGSQNPDLQVNAVTTILNLSILEANKTRIMETDGAINGVIEVLRSGATWEAKANAAATIFSLSGIHSYRRRLGRKTRVTRGLIDLARCGPTGARRDALVAILTLAADRETVARLVEAGVVEMTAEVMDGLPEEAVTILEMVVKRGGLMAVAAAFSSIKKLAVILREGSDRARESAAATLATMCRKGGSDIVADLASLPGIERVIWELMAIGTVRGKRKAATLLRILRRWAAGLDSAGLTEGFSTALTSSTTMVSTQ 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01735 726 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 393 IPR013083 -
Accr7g01735 726 Pfam U-box domain 317 388 IPR003613 GO:0004842|GO:0016567
Accr7g01735 726 Gene3D - 415 561 IPR011989 -
Accr7g01735 726 FunFam RING-type E3 ubiquitin transferase 313 390 - -
Accr7g01735 726 Coils Coil 249 276 - -
Accr7g01735 726 CDD MLKL_NTD 93 182 - -
Accr7g01735 726 Gene3D - 78 182 IPR036537 GO:0007166
Accr7g01735 726 MobiDBLite consensus disorder prediction 294 313 - -
Accr7g01735 726 FunFam RING-type E3 ubiquitin transferase 403 591 - -
Accr7g01735 726 PANTHER U BOX DOMAIN-CONTAINING 87 697 - -
Accr7g01735 726 SUPERFAMILY RING/U-box 315 390 - -
Accr7g01735 726 Gene3D - 563 701 IPR011989 -
Accr7g01735 726 SUPERFAMILY ARM repeat 419 696 IPR016024 -
Accr7g01735 726 CDD RING-Ubox_PUB 318 370 IPR045210 -
Accr7g01735 726 SMART arm_5 447 491 IPR000225 GO:0005515
Accr7g01735 726 SMART Ubox_2 320 383 IPR003613 GO:0004842|GO:0016567
Accr7g01735 726 ProSiteProfiles U-box domain profile. 316 390 IPR003613 GO:0004842|GO:0016567
Accr7g01735 726 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 458 504 IPR000225 GO:0005515
Accr7g01735 726 Pfam Armadillo/beta-catenin-like repeat 448 490 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01735 Accr-Chr7 47494446 47496626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01735 50 702 U-box Gene Family AT5G01830 59.209 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01735 - - qsa:O6P43_026334 949.503