Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01726 ATGCATCGCTTTCTTCTCGACACCGGGGTAACTGGGTCGCCGGCAGATGGAAACAAGACTCGCGAATCGTTCGTCGGCGATGTGAACTTCGACGCGAACATGGTGATCATATTGGCGGCTTTATTGTCGGCATTAATATGCGCGCTTGGATTGAACTCGATAGTGCGATGTGTGTTGCGATGTAGCCAAAGATTTTCCACAGAGACCACAGAACAGACAGCTGCAAGGCTTGGCTCAACAGGCCTGAAGAAACGTCACCTGAGCAAGATTCCGGTGAAGGAGTACGGGTCCGGGGTGAATATTCCGTCGACGGAATGTCCTATCTGCCTCGGGGAATTCGAGAAAGGAGATAAGGTGCGAATGCTGCCAAAATGTAATCACGGGTTCCATGTGAGGTGCATTGACACGTGGCTTCTGTCACACTCTTCTTGCCCAAACTGTCGCCACTCGCTACTTGAGAAATCCACAAATCTGAATCCGAATTCGAATCGGAGGCGTGAAGGAGGAGGAGATGTCGCCAGAGCTCAGGCGCCGACAAATGGGTCCAGCGGCAACGGGCAAGTCCACGCTGCGGTGGTCGTCGATGAGCAGGCAAGTTGA 600 0.53 MHRFLLDTGVTGSPADGNKTRESFVGDVNFDANMVIILAALLSALICALGLNSIVRCVLRCSQRFSTETTEQTAARLGSTGLKKRHLSKIPVKEYGSGVNIPSTECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEKSTNLNPNSNRRREGGGDVARAQAPTNGSSGNGQVHAAVVVDEQAS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01726 199 SMART ring_2 106 147 IPR001841 -
Accr7g01726 199 MobiDBLite consensus disorder prediction 155 189 - -
Accr7g01726 199 SUPERFAMILY RING/U-box 87 159 - -
Accr7g01726 199 Pfam Ring finger domain 105 148 IPR001841 -
Accr7g01726 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 153 IPR013083 -
Accr7g01726 199 CDD RING-H2_EL5-like 105 148 - -
Accr7g01726 199 PANTHER RING-H2 FINGER PROTEIN ATL78 25 163 IPR044602 GO:0016567|GO:0016740
Accr7g01726 199 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01726 Accr-Chr7 47342902 47343501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01726 1 167 C3H Transcription Factor Family AT3G10910 55.114 2.13e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01726 K19040 - tcc:18602224 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g01726 7 47342902 47343501 Accr7g01726 7 47342902 47343501 ECH