Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01670 ATGCTGGGTCCGAGATTATATGGATTTGACCTGGTTTTTTGGTTTTTCTGTTTCATCCTCACAGCAGCAGCACAAAAGACACTTCCTTCGGAAGTGGAAGCACTGGTCCAAATCAAGAAAAGTTTGATTGATCCGAAGAACCATCTGAGGAATTGGAATAAGGGCGACCCTTGTGCATCAAACTGGACTGGTGTCTTGTGTTTTAATGGGATTGAGACTGATGGATACTTCCAAGTCCGTGAGCTTTACTTAATGACTTCGAATCTCTCTGGAAGTCTAGCACCTCAGCTTGGTCAGCTATCGCAGCTTGAAATAATGAATTTCATGTGGAATGATCTGACAGGAACCATACCAAAGGAGATTGGGAATATCAAATCGTTGAAACTCTTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCTGATGAACTTGGCAATCTCTCAAACTTGAATAGGCTCCAACTTGACCAAAACCAACTGTCAGGTCCAATACCACAATCGTTTACCAACTTGATCAGTGTTAAACACATCCACTTGAACAATAACTCATTTACTGGTCAAATTCCTAGTGAACTTTCAAAGCTACCCCATCTTTTGCATTTGCTTGTTGACAATAACAACTTTTCTGGCCATCTTCCACCAGAATTTTCCATGCTACCGTTGTTGCGCGTACTCCAAGTCGATAACAATAATTTTAGTGGAACAGAAATTCCTTCTACATATGCAAACCTTTCCAAGCTAGTAAAACTAAGTCTTAGAAACTGCAGCTTGCAAGGAGCTGTTCCTGATCTGAGTTCGATAACCGAGCTTACCTATTTGGATCTTAGCTGGAATCATCTTACTGGACCCATACCATCAAAGAAACTTTCAGATAACATGACAACTATTGACCTATCAAATAACAGGATCAACGGATCTATTGGTCGAGGCGTCAAATTACTTCCTTTACTTCAAAGATTGTCACTAGAGAACAATTCTCTGTCTGGATCCATCCCTGCCAATATATGGCGGAAATTCACTAGGAGTGATAAGCTCACAATTGATCTCCGCAATAATTCATTTTCAGACATTTCAGGCAGTTCAAGAGTACCAGCAAATGTCACTTTGAGGCTTGCTGGCAATCCTATCTGTAAGGATTCTAACATTCAAAATATTGGTCATTATTGTGCCTTTGAAGGGGTTGAATCTGAAAAATCCATGAATTCAACAACTGACTGTCCTGCTCAAGCTTGTCCAGCGGATGATTTTTATGAATATGTCCCAGATTCCCCTGTTCCCTGCTATTGTGCAGCACCCCTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTTTCTCCTTATAGAACTTCTTTTGAATTATATCTGACTCAGACTTTAGATTTGGACTGGTACCAAGTATGGATAGACTCAATTGCTTGGGAAGTAGGACCTCGTCTTAGGATGTATTTGAAACTTTATCCTAATTACAATGATTTCCACTCTAATACGTTCAATACAAGTGAGATACGGCGTATTCGAGAACAATTTGGATCATGGAATTTTCCTCCCACTGATTTTTTTGGACCATATGAATTCCTGAACTTCACTCTCCTTGGACCTTATGAAGAGTTAATTGTTGAGACAAATAAGGGGAAGATCAGTACAACCCTGTTAGTAGTTGTCGTTATTGCAGCTATTGCTTGTGCTGTCACAATCTCTGCAATTGTCATTCTCGTGATAGCCAAAAGACATATCAAATACCGTCCCAAGCTATCCAAGAATCATATGTCCTCTAATATTTCCATCAAAATTGATGGTGCGAAAGCATTCACTTTCGAAGAACTGGCTCTTGCTACGGACAATTTCAGCAGTTCAACTGTAGTTGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGCATTCTGCTTGATAAAACTGTTGTGGCTGTAAAGCGAGTAGATGAAGGTTCTTTACAAGGCCAAAAAGAATTTTTGACTGAGATTAAACTTCTATCAAGGTTGCATCATCGAAATTTAGTCTCATTGGTTGGATATTGTCATGAAGAAGGAGAGCAGATTCTGGTTTATGAGTTCATGCCTAATGGTAGCTTGCAGCAATGGATATCTGGTAAAAGGAAGGGAAACCTAAACTTTGCTATGAGGATGAGGATTGCAATGGGTGCCGCCAAGGGCATACTGTATCTCCATACCGACGCTAACCCTCCCATATTCCACCGAGATATTAAAGCTAGCAACATACTTCTGGACCACATGCTGGTTGCAAAAGTGTCTGACTTTGGACTCTCACGACTTGCACCGGATATGGATGACAAAGGAAACATGCCTAGATATGTGTCAACAGTTGTGAGGGGAACACCAGGATACTTAGATCCGGAGTATTTTTTGACTCGTATTTTAACGGACAAAAGTGATGTTTATAGCTTGGGGATTGTGTTTCTAGAGCTTTTGACAGGCATGCATCCAATATCAAATGGGAAACACATTGTTCGTGAGGTTAATGAGGCGCATCAGGGTGGCACGATATCTTCCATTATAGATAGCAATATGGGTTTATATCCATCAGATTGTGTGGACAAGTTTCTAAATCTTTCCCTCAGTTGTTGCCATGAGAATCCAGAGGAGAGACCAGGCATGATAGATGTGGTGAGGGAGTTGGAGATTATTCTCTCAATGTTGCCTGATTCTGAAATTGCTTTCCCAGAGAGTGCACATGATTTTTCTGTCAACATGGCTTCATCATCATCAACATCATCGAAATCCTACATGGCAAGGGACGACCAAAGTATGTCCTCTCCTATGTTGTCAGGAAGCAACCTTGTCAGTGATGTTATTCCCACCATTATTCCTCGTTAA 2862 0.4071 MLGPRLYGFDLVFWFFCFILTAAAQKTLPSEVEALVQIKKSLIDPKNHLRNWNKGDPCASNWTGVLCFNGIETDGYFQVRELYLMTSNLSGSLAPQLGQLSQLEIMNFMWNDLTGTIPKEIGNIKSLKLLLLNGNKLSGSLPDELGNLSNLNRLQLDQNQLSGPIPQSFTNLISVKHIHLNNNSFTGQIPSELSKLPHLLHLLVDNNNFSGHLPPEFSMLPLLRVLQVDNNNFSGTEIPSTYANLSKLVKLSLRNCSLQGAVPDLSSITELTYLDLSWNHLTGPIPSKKLSDNMTTIDLSNNRINGSIGRGVKLLPLLQRLSLENNSLSGSIPANIWRKFTRSDKLTIDLRNNSFSDISGSSRVPANVTLRLAGNPICKDSNIQNIGHYCAFEGVESEKSMNSTTDCPAQACPADDFYEYVPDSPVPCYCAAPLRIGYRLKSPSFSYFSPYRTSFELYLTQTLDLDWYQVWIDSIAWEVGPRLRMYLKLYPNYNDFHSNTFNTSEIRRIREQFGSWNFPPTDFFGPYEFLNFTLLGPYEELIVETNKGKISTTLLVVVVIAAIACAVTISAIVILVIAKRHIKYRPKLSKNHMSSNISIKIDGAKAFTFEELALATDNFSSSTVVGQGGYGKVYKGILLDKTVVAVKRVDEGSLQGQKEFLTEIKLLSRLHHRNLVSLVGYCHEEGEQILVYEFMPNGSLQQWISGKRKGNLNFAMRMRIAMGAAKGILYLHTDANPPIFHRDIKASNILLDHMLVAKVSDFGLSRLAPDMDDKGNMPRYVSTVVRGTPGYLDPEYFLTRILTDKSDVYSLGIVFLELLTGMHPISNGKHIVREVNEAHQGGTISSIIDSNMGLYPSDCVDKFLNLSLSCCHENPEERPGMIDVVRELEIILSMLPDSEIAFPESAHDFSVNMASSSSTSSKSYMARDDQSMSSPMLSGSNLVSDVIPTIIPR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01670 953 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Accr7g01670 953 SUPERFAMILY L domain-like 45 386 - -
Accr7g01670 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Accr7g01670 953 FunFam Leucine-rich repeat protein kinase family protein 583 694 - -
Accr7g01670 953 Gene3D Ribonuclease Inhibitor 238 418 IPR032675 -
Accr7g01670 953 Gene3D Transferase(Phosphotransferase) domain 1 695 901 - -
Accr7g01670 953 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
Accr7g01670 953 CDD STKc_IRAK 625 891 - -
Accr7g01670 953 Pfam Protein kinase domain 621 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01670 953 Gene3D Ribonuclease Inhibitor 190 237 IPR032675 -
Accr7g01670 953 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Accr7g01670 953 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Accr7g01670 953 PANTHER RECEPTOR-LIKE PROTEIN 55 38 893 - -
Accr7g01670 953 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 695 903 - -
Accr7g01670 953 SMART LRR_typ_2 220 244 IPR003591 -
Accr7g01670 953 SMART LRR_typ_2 148 171 IPR003591 -
Accr7g01670 953 SMART LRR_typ_2 315 339 IPR003591 -
Accr7g01670 953 SMART LRR_typ_2 196 219 IPR003591 -
Accr7g01670 953 Gene3D Phosphorylase Kinase; domain 1 580 694 - -
Accr7g01670 953 MobiDBLite consensus disorder prediction 917 937 - -
Accr7g01670 953 SUPERFAMILY Protein kinase-like (PK-like) 605 920 IPR011009 -
Accr7g01670 953 SMART serkin_6 619 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01670 953 ProSiteProfiles Protein kinase domain profile. 619 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01670 Accr-Chr7 45903730 45916084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01670 5 899 Receptor kinase-like Gene Family AT5G01950 60.044 0.0 1077
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Accr7g01670 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01670 - - gmx:100815005 1298.88