LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr7g01669	ATGCTGGGTCGGAGATTATATGGATTTGGCTTGGTTTTATCGTTTTTCTGTTGCATCCTCACAGCAGCAGCACAAAAGACATTTCCTTCGGAAGTGCAAGCACTGGTCCAAATCAAGAAAAGTTTGATTGATCCGACGAACCATCTGAGGAATTGGAATAAGGGCGACCCTTGTGCATCAAACTGGACTGGTGTCTGGTGTTTTAATAGGGTCGAGACTGATGGATACTTCCATGTCCATGAGCTTTACTTAATGACTTCGAATCTATCGGGAAGTCTAGCACCTCAGCTTGGTCAGCTATCGCAGCTTGAAATAATGAATTTCATGTGGAATGATCTGACAGGAACCATACCAAAGGAGATAGGGAATATCAAATCGTTGAGACTCTTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCTGATGAACTTGGCAATCTCTCAAACTTGAATAGGCTCCAACTTGACCAAAACCAACTGTCAGGTCCCATACCACTATCGTTTACCAATTTGATCAATGTTAAACACATCCACTTGAACAATAACTCATTTACTGGTCAAATTCCTCTTGAACTTTCAAAGCTACCCAATCTATTGCATTTGCTTGTTGACAATAACAACTTTTTTGGCCATCTTCCACCAGAATTTTCCATGCTACCGGCATTGCGCATACTCCAAGTCGATAACAATAATTTCAGTGGAACAGAAATTCCTTCTACATACGCAAACTTTTCCAAGCTAGTAAAACTAAGTCTTAGAAACTGCAGCTTGGAAGGAGCTGTTCCTGATCTGAGTTCGATAACCGAGCTTACCTATTTGGATCTTAGCTGGAATCATCTTACTGGACCCATACCATCAAAGAAACTTTCCGATAATATGACAACTATTGACCTATCAAATAACAGGATCAACGGATCTATTGCTGGAGGCATCAAATTACTTCCTTTTCTTCAAAGATTGTCACTAGAGAACAATTCTTTGTCTGGATCCATCCCTTCCAGTATATGGCTGAACTTCACTAGGGATGCTAACCTCACAATTGATCTTCGCAATAATTCATTTTCAGACATTTCAGGCAGTTCAATAGTACCAGCAAATGTCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGGATTCTAACATTCAAAATATTGGTCAATATTGTGCATCCGAAGGGGTTGAATCTGAAAAATCTATGAATTCAACAACTGCCTGTCCTGCTCAAGCTTGTCCAGTGGATGATTTCTATGAATATGTCCCAGATCCCCCTGTTGCCTGCTATTGTGCAGCACCCTTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTTTCTCCTTATAGAATTTATTTTGAATTATATCTTACTCAGACTTTACATTTGGACCGACACCAAGTATGGATAGACTCCATTGCTTGGGAAGTAGGACCTCGTCTTAGGATGTATTTGAAACTTTATCCTAATTACAATGATTCCCACTCTAATAAATTCAATACAAGCGAGGTACGGCGTATTCAAGGACAATTTGGATCATGGAATTTTCCTCGCACTGATCTTTTTGGACCATATGAACTCCTGAACTTCACTCTCCTTGGACCTTATAAAGAGTTAATTGTTGAGACACATAAGGGGAAGATCAGTAGAACCGTGTTAGTAGTTGCCATTATTGCAGCTATTGCTTGTGCTGCCACGATCTCTGCAATTGTCACTCGCATGATAGCCAAAAGACATATCAAATACCGTCCCAAGCTATCCAGGAATAATATGTCCTCTAATATTTCCATCAAAATTGATGGTGTGAAAGCATTCACTTTCAAAGAAGTGGCTCATGCAACTGACAATTTCAGCAGTTCAACTGTAGTTGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGCATTCTGTTTGATAAAACAGTTGTGGCTGTAAAGCGAGTAGATGAAGGTTCTTTACAAGGCCAAAAAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTGCATCATCGAAATCTAGTCTCATTGGTCGGATACTGTGATGAAGAAGGAGAGCAGATTCTTGTTTACGAGTTCATGCCTAATGGTACCTTGCGGGAGTGGATTTCTGGTAAAAGGAAGGGAAACCTAAACTTCGGTTTGAGGATGAGGATTGCAATGGGTGCCGCCAAGGGCATACTGTATCTCCATACCGAGGCTAACCCTCCCATATTCCACCGAGATATTAAAGCTAGCAACATACTTCTGGACCGCATGCTGCTTGCTAAAGTGTCTGACTTTGGGCTCTCACGACTTGCACCGGATATGGATGACGAAGGAAACACGCCTAAATATGTGTCAACAGTTGTGAGAGGAACACCAGGATACTTAGATCCGGAGTATTTTTTGACTCATAAGTTAACGGACAAAAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTTTGACAGGCATGCATCCAATATCACATGGGAAAAACATTGTTCGTGAGGTTAATGAGGCGCGTCAGTGTGGCACGATATCTTCCATTATGGATAGCAATATGGGTGTATATCCATCAGATTGTGTGGACAAGTTTCTAAATCTTTCCCTCAGTTGTTGCCATGAGAATCCAGAGCAGAGACCATGCATGATAGATGTGGTGAGGGAGCTGGAGATTATTCTCTCAATGTTGCCTGATTCTGAAACTGCTTTCACAGACAGTGCATATGATTTTTCTGTCAACATGGCTTCATCATCATCAACATCATCGAAATCCTACATGGCAAGGGACGGCCAAAACATGTCCTCTCCTATGTTGTCAGGAAGCAACCTTGTCAGTGATGTTATTCCCACCATTGTTCCTCGTTAA	2862	0.4119	MLGRRLYGFGLVLSFFCCILTAAAQKTFPSEVQALVQIKKSLIDPTNHLRNWNKGDPCASNWTGVWCFNRVETDGYFHVHELYLMTSNLSGSLAPQLGQLSQLEIMNFMWNDLTGTIPKEIGNIKSLRLLLLNGNKLSGSLPDELGNLSNLNRLQLDQNQLSGPIPLSFTNLINVKHIHLNNNSFTGQIPLELSKLPNLLHLLVDNNNFFGHLPPEFSMLPALRILQVDNNNFSGTEIPSTYANFSKLVKLSLRNCSLEGAVPDLSSITELTYLDLSWNHLTGPIPSKKLSDNMTTIDLSNNRINGSIAGGIKLLPFLQRLSLENNSLSGSIPSSIWLNFTRDANLTIDLRNNSFSDISGSSIVPANVTLRLAGNPICKDSNIQNIGQYCASEGVESEKSMNSTTACPAQACPVDDFYEYVPDPPVACYCAAPLRIGYRLKSPSFSYFSPYRIYFELYLTQTLHLDRHQVWIDSIAWEVGPRLRMYLKLYPNYNDSHSNKFNTSEVRRIQGQFGSWNFPRTDLFGPYELLNFTLLGPYKELIVETHKGKISRTVLVVAIIAAIACAATISAIVTRMIAKRHIKYRPKLSRNNMSSNISIKIDGVKAFTFKEVAHATDNFSSSTVVGQGGYGKVYKGILFDKTVVAVKRVDEGSLQGQKEFLTEIELLSRLHHRNLVSLVGYCDEEGEQILVYEFMPNGTLREWISGKRKGNLNFGLRMRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDRMLLAKVSDFGLSRLAPDMDDEGNTPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTGMHPISHGKNIVREVNEARQCGTISSIMDSNMGVYPSDCVDKFLNLSLSCCHENPEQRPCMIDVVRELEIILSMLPDSETAFTDSAYDFSVNMASSSSTSSKSYMARDGQNMSSPMLSGSNLVSDVIPTIVPR	953

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr7g01669	953	SUPERFAMILY	Protein kinase-like (PK-like)	604	919	IPR011009	-
	Accr7g01669	953	SUPERFAMILY	L domain-like	44	386	-	-
	Accr7g01669	953	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	739	751	IPR008271	GO:0004672\|GO:0006468
	Accr7g01669	953	Pfam	Protein kinase domain	621	885	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr7g01669	953	Gene3D	Phosphorylase Kinase; domain 1	589	694	-	-
	Accr7g01669	953	PANTHER	RECEPTOR-LIKE PROTEIN 55	38	893	-	-
	Accr7g01669	953	ProSiteProfiles	Protein kinase domain profile.	619	892	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr7g01669	953	Gene3D	Ribonuclease Inhibitor	290	413	IPR032675	-
	Accr7g01669	953	ProSitePatterns	Protein kinases ATP-binding region signature.	625	647	IPR017441	GO:0005524
	Accr7g01669	953	FunFam	Leucine-rich repeat protein kinase family protein	583	694	-	-
	Accr7g01669	953	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	695	905	-	-
	Accr7g01669	953	Pfam	Leucine rich repeat N-terminal domain	30	67	IPR013210	-
	Accr7g01669	953	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g06840	29	190	-	-
	Accr7g01669	953	CDD	STKc_IRAK	625	891	-	-
	Accr7g01669	953	Gene3D	Ribonuclease Inhibitor	28	189	IPR032675	-
	Accr7g01669	953	Gene3D	Ribonuclease Inhibitor	190	289	IPR032675	-
	Accr7g01669	953	Gene3D	Transferase(Phosphotransferase) domain 1	695	908	-	-
	Accr7g01669	953	SMART	serkin_6	619	891	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr7g01669	Accr-Chr7	45787522	45798462	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr7g01669	4	900	Receptor kinase-like Gene Family	AT5G01950	61.240	0.0	1107

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Accr7g01669		Pkinase	7.1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr7g01669	-		-	gmx:100815005	1331.24