Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01644 ATGGGCAATTGTGGCACCAGAGAGGAATCGGCTGTTGTCTCCAATGCTCAAGTTCAACAGCTGCATTTGTCGTCTTTGACTGCTAAAACTGCTGCCGGTGAGAAGAAGCATAATCGGTCTGTGTCAGATCTGAGTGACATTTCTACCCCGCGCCATAATTTCGAGGATGCTAGGAAGAATACACTACTTTATACTCATGTCATTGCATTTACATTGTATGAGCTCGAGACTATTACCAAGAGTTTCCGCTCCGATTATATCCTTGGAGAAGGGGGGTTCGGCACTGTCTATAAAGGTTACATTGACGAGAATGTGAGAGTTGGACTCAAATCCCTTCCTGTTGCTGTCAAGGTTCTAAACAAGGAGGGTCTTCAGGGACATCGCGAGTGGCTTACAGAAGTCAATTTCCTGGGGCAGCTCAGGCATCCTAATTTGGTTAAGTTGATCGGATACTGCTGTGAGGACGATCACAGGCTACTTGTATACGAGTTCATGTTTCGAGGAAGTTTAGAGAATCATCTATTCCGAAAGGCAACTGTTCCTTTATCATGGGCTACAAGAATGATGATTGCACTTGGAGCTGCCAAGGGGCTTGCTTTTCTTCATAATGCTGAAAGGCCAGTAATCTATCGAGACTTCAAAACTTCAAATATATTATTGGACTCTGATTATACAGCCAAGCTTTCTGATTTTGGACTAGCAAAAGCTGGACCACAAGGTGATGAAACCCATGTGTCCACCAGGGTTATGGGTACTTATGGATATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACTGCAAGGAGTGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAACTCTTAACCGGAAGGAAATCTGTTGACAAAACAAGACCGGGTAAGGAACAGAGCCTTGTGGATTGGGCTAGACCAAAGCTTAATGACAAGAGAAAGCTCCTGCAGATACTTGATCCTAGATTGGAAAGCCAATACTCAGTGAGAGCAGCACAGAAAGCATGTAGCTTGGCTTACTACTGTTTGAGTCAAAATCCCAAAGCCAGGCCGCTAATGAGTGATGTAGTCGAGACATTGGAACCTTTACAAAGTTGTGATGGTGCTGAAGTCTCATCATTCGGACCAAGTAATGGAGGTGCTGGTCCCTTTGCCATGAGTGGAATCTCCGACTACCGGATGCGCCAGAGGTTTTCAAACAACGTTGGTCCAGGTGCTACTTGTCGGTCTCCGAATCCAAACTGCTCACCCGGCGCTGCCGCAGCCTGCCGGGTCAGATGA 1278 0.4609 MGNCGTREESAVVSNAQVQQLHLSSLTAKTAAGEKKHNRSVSDLSDISTPRHNFEDARKNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQILDPRLESQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCDGAEVSSFGPSNGGAGPFAMSGISDYRMRQRFSNNVGPGATCRSPNPNCSPGAAAACRVR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01644 425 FunFam Probable serine/threonine-protein kinase PBL8 165 375 - -
Accr7g01644 425 Pfam Protein tyrosine and serine/threonine kinase 87 359 IPR001245 GO:0004672|GO:0006468
Accr7g01644 425 FunFam Serine/threonine-protein kinase BIK1 48 164 - -
Accr7g01644 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Accr7g01644 425 CDD STKc_IRAK 88 362 - -
Accr7g01644 425 Gene3D Transferase(Phosphotransferase) domain 1 165 372 - -
Accr7g01644 425 Gene3D Phosphorylase Kinase; domain 1 42 164 - -
Accr7g01644 425 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01644 425 PANTHER OS01G0588500 PROTEIN-RELATED 45 363 - -
Accr7g01644 425 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Accr7g01644 425 SUPERFAMILY Protein kinase-like (PK-like) 59 360 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01644 Accr-Chr7 45396847 45400619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01644 70 359 Glycoside Hydrolase AT3G07070 54.949 3.44e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr7g01644 PK_Tyr_Ser-Thr 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01644 - - mof:131160611 762.681