Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01610 ATGGAAGGTAGCCGGAGGGTGACTCTTTTTGATCAAATGTCCTCCGTTGACGGCCGCCGTGACTCGCTTGCCGGTTCGACCCTTGAAGCTATGATGGCAAGCCACAAGATAGCCTCCGAGCCGAGCCGCCGTCAGTTCAGCAGCAGCAGCCGAACCCTCTCAGACATAATTCGAGAAGACAATTCCAACACGAAGGACAAGAAGTCTTGGAATATCTTCAAAGACAAGCTCTGGCTCAAGCGCGCTGGATCTGCTTGGTTCTCCGCAATTCACATCCCGCCCTTGGATATCTCTATCCCTAACCGGAATAACAACAACCCCGACGCTCCGTCCACAAGTAACCCGCCCGAATTCTCAGGTCAGATCTTAACCGGAGCGCGATCTTCCCTCGTCGCCGCCTTCTCCGGCGAGTCAACACATCAAACTTCTCGCCCCCATTCCTTCCGTCGAGACGGCTCGGTAACTTTCCAGGACTACTTAGACAGCTACGGCTACGGATCCGAGTGCGACGACTGGGATCCGGCGCGTGAAGGCACGCGCCGCCTGTCCACAATTTTATCAGAGGAGAGAGCATTGTCTGCGAGGGAGGCAGAGGCTGCCGCCGCTGCATCATCGGCGGCGGCGGCACAGGGGGAAGACGAGCCGGTGAGGATGTCACTGACGCTGATGGATTTACTGGAGGAGACAGATAGGCAAATGGGGTTTGATGCGCAATACAGTACAGGATATGAAGACTACGATGAAGAAGTGCGAAAGAGGATAAAAATGGAGAAGGAAGAAGATGAAGATGAAGAAGGAGAAGGAGAAGAAGAAGAAAGCAAATGGAGCGTGCAGGAAAATTGTTGTGTGTGTATGGTGAGGCATAAAGGAGCAGCGTTTATACCATGTGGACACACATTTTGCAGGCAATGTTCCAGAGAGCTTTGGGTGAGCAGAGGCCATTGTCCACTCTGCAACAATGTTATTCTGGAAATTCTTGACTTGTTCTGA 990 0.5263 MEGSRRVTLFDQMSSVDGRRDSLAGSTLEAMMASHKIASEPSRRQFSSSSRTLSDIIREDNSNTKDKKSWNIFKDKLWLKRAGSAWFSAIHIPPLDISIPNRNNNNPDAPSTSNPPEFSGQILTGARSSLVAAFSGESTHQTSRPHSFRRDGSVTFQDYLDSYGYGSECDDWDPAREGTRRLSTILSEERALSAREAEAAAAASSAAAAQGEDEPVRMSLTLMDLLEETDRQMGFDAQYSTGYEDYDEEVRKRIKMEKEEDEDEEGEGEEEESKWSVQENCCVCMVRHKGAAFIPCGHTFCRQCSRELWVSRGHCPLCNNVILEILDLF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01610 329 CDD RING-HC 281 318 - -
Accr7g01610 329 SMART ring_2 281 318 IPR001841 -
Accr7g01610 329 MobiDBLite consensus disorder prediction 98 121 - -
Accr7g01610 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 329 IPR013083 -
Accr7g01610 329 MobiDBLite consensus disorder prediction 97 121 - -
Accr7g01610 329 ProSiteProfiles Zinc finger RING-type profile. 281 319 IPR001841 -
Accr7g01610 329 Pfam Zinc finger, C3HC4 type (RING finger) 278 323 - -
Accr7g01610 329 SUPERFAMILY RING/U-box 280 325 - -
Accr7g01610 329 PANTHER OS01G0917900 PROTEIN 19 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01610 Accr-Chr7 44921290 44922279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01610 6 329 C3H Transcription Factor Family AT3G25030 38.973 2.14e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01610 - - pcin:129290516 496.893