Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01561 ATGAGTAATGAGCGTGCTCTCAGAAGTTACCGACGAAGGAAGGCTGTTTTGGATTTGGATCTTAATAGAGCTCCACCTGAGAATCAAGAGCAGGAGGGCCCTTCGAATCCGCAGGAACCTCATTTAGTTCAAGTTCTCCAGCAACCACAAGATGTACAGCCTATTGATGTGGAGGCCATTGAGGATGATGTCATTGAATGTACAGCAAGTGCTTTTGCTGAAGCTAAAAACAATTCAAGAAGGAATCGTGGGAGGACTATAGTGGATGTGGATTTGGATTATCAGAGTTGGGTAACTGAAAATGCTACCAACAATTCCAGAAGAGATTCTTCGAACCAAACAATTCTTAATTCTGATGTATGCATAAACTTGGAAGGAAGTGGCAGTTCTGAGTGGGGGAATGATAAAAAGTTGCCTCAACCTCCAATGGAGCCTGTATTTAGCTGTCCAATATGTATGGGCCCATTTATTGAAGAGGTGTCGACAAGGTGTGGTCATATTTTCTGTAAGAGTTGCATCAAGGCTGCTATAAGTGCACAGGGTAAATGCCCTACATGTAGGAAAAAGGTCACTGCAAAAGAGCTCATCAGGGTGTTTCTACCATCAACTAGTTGA 615 0.4293 MSNERALRSYRRRKAVLDLDLNRAPPENQEQEGPSNPQEPHLVQVLQQPQDVQPIDVEAIEDDVIECTASAFAEAKNNSRRNRGRTIVDVDLDYQSWVTENATNNSRRDSSNQTILNSDVCINLEGSGSSEWGNDKKLPQPPMEPVFSCPICMGPFIEEVSTRCGHIFCKSCIKAAISAQGKCPTCRKKVTAKELIRVFLPSTS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01561 204 SMART ring_2 149 186 IPR001841 -
Accr7g01561 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 203 IPR013083 -
Accr7g01561 204 MobiDBLite consensus disorder prediction 15 41 - -
Accr7g01561 204 Pfam Zinc finger, C3HC4 type (RING finger) 149 186 - -
Accr7g01561 204 ProSiteProfiles Zinc finger RING-type profile. 149 187 IPR001841 -
Accr7g01561 204 SUPERFAMILY RING/U-box 142 199 - -
Accr7g01561 204 PANTHER ELFLESS, ISOFORM B 3 204 - -
Accr7g01561 204 ProSitePatterns Zinc finger RING-type signature. 164 173 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01561 Accr-Chr7 43240004 43243662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01561 2 203 C3H Transcription Factor Family AT5G48655 51.961 1.50e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01561 K22651 - qsa:O6P43_016885 254.218