Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01543 ATGGTAAGCTTGAGAAGGCGCAGACTTTTGGGGCTATGCTCAGGAAACAGTTCCTTTGTTACTCCACTTCCGCTATATTGTGAGAACCTCACTGCTTCTCAAGATTCGGCTCAGCCTGCTAAATCTAAGACCGCCCAATCTGACAATGGAATTGGAAGCATCCTACATGGTATAGGAACTCAACTACTAAAAAATCCCATTGTGAAAGAAGAACCAGTTTCCTCAAATGTATCTGGCTCTAGCTCGTCAAAGGAGCAGTCTACTCAGCTGTTTACTGGGCCTCCTATTAAACGCAGAAAGCCACACAGGAGAAAGAATATGCATAGTCAAGACTCATGTGTAATGAGAGGTGTCTACTTTAAAAATATGAAGTGGCAGGCAGCAATCAAAGTGGACAAGAAACAGATCCATCTTGGAACTGTTAATTCTCAAGAAGAGGCTGCTCGACTATATGACAGGGCTGCTTTCATGTGTGGGAGGGAGCCCAACTTTGAGCTTTCAGACAAAGAGAAGCAAGAACTAAGTGAATTGCAATGGGATGAGTTCTTGGCATTTACTCGACAAACAATCACCAGTAAAAAACACAAAAGAAGACTTGGCTCTAGGCTGCGCAGTGAGTCTGAGCCACCTACATCTCATGATGGGGACAGTCAGCTAGGCGTCGACGCCACCTCAGCTTCTGACGATGCTGATCAAGAAACATCAGACTCATGA 714 0.4482 MVSLRRRRLLGLCSGNSSFVTPLPLYCENLTASQDSAQPAKSKTAQSDNGIGSILHGIGTQLLKNPIVKEEPVSSNVSGSSSSKEQSTQLFTGPPIKRRKPHRRKNMHSQDSCVMRGVYFKNMKWQAAIKVDKKQIHLGTVNSQEEAARLYDRAAFMCGREPNFELSDKEKQELSELQWDEFLAFTRQTITSKKHKRRLGSRLRSESEPPTSHDGDSQLGVDATSASDDADQETSDS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01543 237 SUPERFAMILY DNA-binding domain 114 159 IPR016177 GO:0003677
Accr7g01543 237 MobiDBLite consensus disorder prediction 212 228 - -
Accr7g01543 237 ProSiteProfiles AP2/ERF domain profile. 90 156 IPR001471 GO:0003700|GO:0006355
Accr7g01543 237 MobiDBLite consensus disorder prediction 71 110 - -
Accr7g01543 237 FunFam ethylene-responsive transcription factor-like protein At4g13040 115 166 - -
Accr7g01543 237 Gene3D AP2/ERF domain 115 166 IPR036955 GO:0003700|GO:0006355
Accr7g01543 237 SMART rav1_2 116 171 IPR001471 GO:0003700|GO:0006355
Accr7g01543 237 MobiDBLite consensus disorder prediction 192 237 - -
Accr7g01543 237 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 103 204 - -
Accr7g01543 237 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01543 Accr-Chr7 42592786 42598469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01543 67 188 AP2-EREBP Transcription Factor Family AT1G72570 27.338 1.66e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr7g01543 AP2 8.5e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01543 - - gmx:100306701 265.003