Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01542 ATGGTAAGCTTGAGAAGGCGCAGACTTTTGGGGCTATGCTCAGGAAACAGTTCCTTTGTTACTCCACTTCCGCTATATTGTGAGAACCTCACTGCTTCTCAAGATTCGGCTCAGCCTGCTAAATCTAAGACCGCCCAATCTGACAATGGAATTGGAAGCATCCTACATGGTATAGGAACTCAACTACTAAAACAGAATCCCATTGTGAAAGAAGAACCAGTTTCCTCAAATGTATCTGGCTCTAGCTCGTCAAAGGAGCAGTCTACTCAGCTGTTTACTGGGCCTCCTATTAAACGCAGAAAGCCACACAGGAGAAAGAATATGCATAGTCAAGACTCATGTGTAATGAGAGGTGTCTACTTTAAAAATATGAAGTGGCAGGCAGCAATCAAAGTGGACAAGAAACAGATCCATCTTGGAACTGTTAATTCTCAAGAAGAGGCTGCTCGACTATATGACAGGGCTGCTTTCATGTGTGGGAGGGAGCCCAACTTTGAGCTTTCAGACAAAGAGAAGCAAGAACTAAGTGAATTGCAATGGGATGAGTTCTTGGCATTTACTCGACAAACAATCACCAGTAAAAAACACAAAAGAAGACTTGGCTCTAGGCTGCGCAGTGAGTCTGAGCCACCTACATCTCATGATGGGGACAGTCAGCTAGGCGTCGACGCCACCTCAGCTTCTGACGATGCTGATCAAGAAACATCAGACTCATGA 717 0.4491 MVSLRRRRLLGLCSGNSSFVTPLPLYCENLTASQDSAQPAKSKTAQSDNGIGSILHGIGTQLLKQNPIVKEEPVSSNVSGSSSSKEQSTQLFTGPPIKRRKPHRRKNMHSQDSCVMRGVYFKNMKWQAAIKVDKKQIHLGTVNSQEEAARLYDRAAFMCGREPNFELSDKEKQELSELQWDEFLAFTRQTITSKKHKRRLGSRLRSESEPPTSHDGDSQLGVDATSASDDADQETSDS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01542 238 SUPERFAMILY DNA-binding domain 115 160 IPR016177 GO:0003677
Accr7g01542 238 SMART rav1_2 117 172 IPR001471 GO:0003700|GO:0006355
Accr7g01542 238 ProSiteProfiles AP2/ERF domain profile. 91 157 IPR001471 GO:0003700|GO:0006355
Accr7g01542 238 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 205 - -
Accr7g01542 238 MobiDBLite consensus disorder prediction 193 238 - -
Accr7g01542 238 MobiDBLite consensus disorder prediction 71 111 - -
Accr7g01542 238 MobiDBLite consensus disorder prediction 71 94 - -
Accr7g01542 238 MobiDBLite consensus disorder prediction 213 229 - -
Accr7g01542 238 FunFam ethylene-responsive transcription factor-like protein At4g13040 116 167 - -
Accr7g01542 238 Gene3D AP2/ERF domain 116 167 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01542 Accr-Chr7 42592786 42598469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01542 68 189 AP2-EREBP Transcription Factor Family AT1G72570 27.338 1.73e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr7g01542 AP2 8.6e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01542 - - gmx:100306701 263.077