Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01512 ATGAGTTGTTGGTCACCAGCATCTGTTTTTACTAATCAACTTACACCACTGTCTGCTGCAAGCACCAAGTCTGATGTTAATATCAAAAGCAGCACCAGTTTTATATGTAGCCCAAGTCAAGGAAGGTGCTATCTCTCTGTTTCTGAGAGCCATCATAAAGTGAGGAGACTCAGGATCTCTGGGGTAGTTAAATCTGGACAAGGACTGACAAAATTTCCGGCCCGACAAGGAACTTGGGAAGAACCTGATGATGGCAGTGGTAGTGAGTATGATGAAGAAGAAGAAGATGAGGAAACGGAAGATGAGAACTATGGCTTTGAAAGTGATTGGGAAGAGGAAGAGATAACGTCATCAGCTGTTAATAGTGTTATTTCTGTGGACAAGTATGGGGAGGATATTAAAAAAGAGGTTGAACAGCTTTTGGAGCCTGAAGAAAGAGCAGTCTTGCAACAGAATTTGACTCCAAACTTGGAAAAAATTTCAACTGAAAAATGGAGCCCACTGCACACTTTAGCACTATCAACACAGATAAGATGTATGGATCAGCTACTTGAAAGCGGCGTTGATATTGATCTTAAGAACAAGGAAGGTCTCACTGCACTTCATATAGCTATTATAGGAAAGAAAGAAGCTGTAATAAGCCATCTTTTACGTAAAGGTGCAAGTCCTCATGTCAGGGATAAGGATGGTGCCACCCCGCTTCATTACGCAGTTCAAGTTGGTGCCAAGCAAACTGTAAAGTTATTGATCAAATATGAAGTTGACGTCAACATTGCAGATAATGAAGGTTGGACCCCATTGCACGTTGCTATTCAAAGCAGAAATAGAGATATTGCAAAAATTTTGTTAGTCAACGGTGCGGATAAGAACAGAAGAAACAAGGATGGGAAAACAGCATTGGATTTAAGTTTATGTTATGGGAAGGACTTCAAGTCTTATGACCTTGGCAAATTATTGAAGGTAGTTCCAGTTGACACTGATTATTGA 987 0.4043 MSCWSPASVFTNQLTPLSAASTKSDVNIKSSTSFICSPSQGRCYLSVSESHHKVRRLRISGVVKSGQGLTKFPARQGTWEEPDDGSGSEYDEEEEDEETEDENYGFESDWEEEEITSSAVNSVISVDKYGEDIKKEVEQLLEPEERAVLQQNLTPNLEKISTEKWSPLHTLALSTQIRCMDQLLESGVDIDLKNKEGLTALHIAIIGKKEAVISHLLRKGASPHVRDKDGATPLHYAVQVGAKQTVKLLIKYEVDVNIADNEGWTPLHVAIQSRNRDIAKILLVNGADKNRRNKDGKTALDLSLCYGKDFKSYDLGKLLKVVPVDTDY 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01512 328 ProSiteProfiles Ankyrin repeat region circular profile. 229 261 - -
Accr7g01512 328 Pfam Ankyrin repeats (3 copies) 211 293 IPR002110 GO:0005515
Accr7g01512 328 ProSiteProfiles Ankyrin repeat profile. 196 228 IPR002110 GO:0005515
Accr7g01512 328 PRINTS Ankyrin repeat signature 230 245 IPR002110 GO:0005515
Accr7g01512 328 PRINTS Ankyrin repeat signature 278 292 IPR002110 GO:0005515
Accr7g01512 328 ProSiteProfiles Ankyrin repeat region circular profile. 262 294 - -
Accr7g01512 328 MobiDBLite consensus disorder prediction 70 111 - -
Accr7g01512 328 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 120 320 - -
Accr7g01512 328 ProSiteProfiles Ankyrin repeat profile. 163 195 IPR002110 GO:0005515
Accr7g01512 328 Gene3D - 230 309 IPR036770 -
Accr7g01512 328 SMART ANK_2a 196 225 IPR002110 GO:0005515
Accr7g01512 328 SMART ANK_2a 229 258 IPR002110 GO:0005515
Accr7g01512 328 SMART ANK_2a 262 291 IPR002110 GO:0005515
Accr7g01512 328 SMART ANK_2a 163 192 IPR002110 GO:0005515
Accr7g01512 328 MobiDBLite consensus disorder prediction 84 111 - -
Accr7g01512 328 SUPERFAMILY Ankyrin repeat 155 307 IPR036770 -
Accr7g01512 328 ProSiteProfiles Ankyrin repeat profile. 229 261 IPR002110 GO:0005515
Accr7g01512 328 ProSiteProfiles Ankyrin repeat profile. 262 294 IPR002110 GO:0005515
Accr7g01512 328 Gene3D - 129 229 IPR036770 -
Accr7g01512 328 ProSiteProfiles Ankyrin repeat region circular profile. 196 228 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01512 180 303 Ion Channels AT2G25600 30.323 4.21e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01512 - - lja:Lj0g3v0067589.2 410.223