Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01508 ATGGATGAGGATTTCGATATGCCCCCGCAGGAGGAGATGAGCGAGGACTTCGATCTCCCCGATGACGCCTCTTCTCTTAAGGTTGGGGAGGAGAAGGAGATCGGAAAGCAGGGATTGAAGAAGAAGCTCCTCAAGGAAGGTGAAGGCTGGGACACACCTGAAGTGGGCGATGAAGTCGAAGTTCATTACACGGGAACGCTGCTTGATGGGACCAAGTTTGATTCGAGCCGCGACAGAGGGACCCCCTTTAGGTTCACGCTTGGACAAGGGCAAGTAATTAAAGGATGGGATCAGGGTATTAAAACCATGAAGAAAGGTGAAAATGCCATTTTCACCATCCCTGCTGAACTAGCATATGGTGAATCTGGTTCGGCTCCAACCATTCCTCCAAATGCTACTCTTCAATTTGATGTCGAGCTTCTGTCTTGGACCAGTGTGAAAGACATAAGCAAGGATGGTGGCATATTTAAGAAAATACTTACTGAAGGAGATAAATGGGAGAACCCCAAAGATCCTGATGAAGTTTTAGTTAAATATGAAGCTCGTCTTGAAGATGGAACACTTGTATCAAAATCTGATGGAGTGGAGTTTACTGTGAACGAGGGTTACTTTTGTCCTGCGTTTGCAAAGGCTGTGAAAACCATGAAGAAGGGAGAGAAAGTGCTTTTAACTGTGATGCCCCAATATGGTTTTGGTGAGAAGGGTAAACCAGCACATGGGGATGAAGGTGCAGTTCCACCAAATGCATCCTTGCAGATTACTCTTGAATTGGTATCATGGAAGATTGTTTCAGAAGTAACTGATGATAAGAAGATCATTAAGAAAATCCTTAGTGAAGGGGAAGGATATGAGCGTCCAAATGAAGGAGCTGTTGTGAAAGTGAAATTGATTGGCAAACTGCAAGATGGCACTGTCTTCACGAAGAAGGGCCATGATGAAGAGGTGTTTGAATTCAAAACTGATGAAGAGCAAGTCATTGATGGACTCGATAGAGCAATCTTGACTATGAAAAAGGGTGAAGTAGCCTTGTTGTCTGTTGCTCCTGAGTATGCCTTTGGTTCGTCCGAGTCCAAACAAGAATTGGCTGTTGTTCCTCCCAACTCAACTGTTTACTATGAAGTCGAACTAGTATCGTTTGTGAAGGAGAAGGAGTCCTGGGATATGAACACACAGGAGAAGATTGAAGGTGCTGTTAAGAAGAAAGAAGAAGGAAATGTGTGGTTCAAGAGTGGAAAATATGCTAAAGCTTCTAAAAGATATGACAAGGCTGCCAAGTACATAGAGTATGATTCCTCCTTCAATGAAGAGGAGAAGAAGCAGGCTAAGGCACTGAAGGTTGCTTGCAACCTGAACAATGCGGCTTGCAAGTTGAAGTTGAAAAATTACATTGAAGCTGAGAGATTGTGTACCAAGGTTCTGGATCTTGAAAGCACAAACGTAAAGGCACTTTATAGAAGAGCTCAGGCTTATATCGAGTTGACTGACTTGGATTTGGCAGAACTTGATATTAAGAAAGCTCTTGAGATAGACCCGGACAACAGGGATGTGAAGCTGGAGTACAAGACTTTGAAGCAAAAAGTGAAGGAGTATAACAGAAAGGAGGCTAAATTTTATGGAAACATGTTTGCCAAGATGACTAAGCCGGATTCAAATGACAATAACAAAGCAGCAGCGAACAAGGATGCTGAACCTATGAGCATTGACAGCAAAGCATAA 1716 0.433 MDEDFDMPPQEEMSEDFDLPDDASSLKVGEEKEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRGTPFRFTLGQGQVIKGWDQGIKTMKKGENAIFTIPAELAYGESGSAPTIPPNATLQFDVELLSWTSVKDISKDGGIFKKILTEGDKWENPKDPDEVLVKYEARLEDGTLVSKSDGVEFTVNEGYFCPAFAKAVKTMKKGEKVLLTVMPQYGFGEKGKPAHGDEGAVPPNASLQITLELVSWKIVSEVTDDKKIIKKILSEGEGYERPNEGAVVKVKLIGKLQDGTVFTKKGHDEEVFEFKTDEEQVIDGLDRAILTMKKGEVALLSVAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKEKESWDMNTQEKIEGAVKKKEEGNVWFKSGKYAKASKRYDKAAKYIEYDSSFNEEEKKQAKALKVACNLNNAACKLKLKNYIEAERLCTKVLDLESTNVKALYRRAQAYIELTDLDLAELDIKKALEIDPDNRDVKLEYKTLKQKVKEYNRKEAKFYGNMFAKMTKPDSNDNNKAAANKDAEPMSIDSKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01508 571 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 257 IPR001179 GO:0003755
Accr7g01508 571 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 141 IPR001179 GO:0003755
Accr7g01508 571 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 377 IPR001179 GO:0003755
Accr7g01508 571 SUPERFAMILY FKBP-like 34 148 - -
Accr7g01508 571 SUPERFAMILY FKBP-like 148 261 - -
Accr7g01508 571 Gene3D - 28 147 IPR046357 GO:0003755
Accr7g01508 571 Gene3D - 262 382 IPR046357 GO:0003755
Accr7g01508 571 MobiDBLite consensus disorder prediction 1 32 - -
Accr7g01508 571 Pfam Tetratricopeptide repeat 481 513 IPR013105 -
Accr7g01508 571 Gene3D Tetratricopeptide repeat domain 383 540 IPR011990 GO:0005515
Accr7g01508 571 ProSiteProfiles TPR repeat profile. 480 513 IPR019734 GO:0005515
Accr7g01508 571 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
Accr7g01508 571 MobiDBLite consensus disorder prediction 1 19 - -
Accr7g01508 571 FunFam Peptidylprolyl isomerase 29 147 - -
Accr7g01508 571 SUPERFAMILY FKBP-like 264 399 - -
Accr7g01508 571 PANTHER PEPTIDYLPROLYL ISOMERASE 8 147 - -
Accr7g01508 571 SUPERFAMILY TPR-like 385 545 IPR011990 GO:0005515
Accr7g01508 571 Coils Coil 513 533 - -
Accr7g01508 571 FunFam Peptidylprolyl isomerase 385 540 - -
Accr7g01508 571 Gene3D - 148 261 IPR046357 GO:0003755
Accr7g01508 571 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Accr7g01508 571 SMART tpr_5 446 479 IPR019734 GO:0005515
Accr7g01508 571 SMART tpr_5 397 430 IPR019734 GO:0005515
Accr7g01508 571 SMART tpr_5 480 513 IPR019734 GO:0005515
Accr7g01508 571 FunFam Peptidylprolyl isomerase 262 382 - -
Accr7g01508 571 FunFam Peptidylprolyl isomerase 148 261 - -
Accr7g01508 571 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 380 IPR001179 GO:0003755
Accr7g01508 571 MobiDBLite consensus disorder prediction 545 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01508 Accr-Chr7 41741202 41745293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01508 1 545 Calmodulin-binding Proteins AT3G25230 79.781 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01508 K09571 - vvi:100266654 947.962