Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01507 ATGGAAAACGATTTCTTTCTAAATGGTTCAGCTCTTCACTTCGAGCCTCCTTCGTCTTCTTCTCCTTCATTACCCACTTGGCATTATCTCTCCTCCGCCGCCATGGATATTCCAGTTTCCTCCGACCAACCTCAACAGCAACAACAAGACTGTTTCTACAATCCCTCATGGGAAAAGTCAACCATTGATCATAATCATCATCATCACGCTCTTCAGTTCGATTCCGCGTTGAGTTCAATGGTTTCTTCTCCGGCAGCTTCCAATTCGAACTTGTCCAACGACAATTTCGTCATCAGGGAACTGATTGGAAAATTGGGCTCTATTGGGAACGCGGGCGAGATCTCTTCTTACATGAATGGAAATAATAACAGTACCAACACTTCATGTTACAGTACACCTTTGAGTTCTCCTCCTAAACTGAACATTCCTCCTCCATTAATGAAAGACAAATTACCAATGGCTTTGAATTCCAGTGTGGCTGAATTCTCAGCTGATCCTGGTTTTGCTGAGAGGGCTGCCAAGTTTTCTTGCTTTGGAAGTAGGAGCTTCAATGGAAGAAGTTCAAGACAAGTTGGGATTAATAATAATGCTGACTTCACTCAGAGATCTAGTCCATTAATGGAAAATGGCAAGCTTTCTAGAGTTTCAAGTAGTCCATCGTTGAAAGCACTTGGATCTCAAATGGAAAATAAGAATTCTCCTTTGAATTCTCAGGAGGAATCTACAATCTCTGAGCAAAACCCAAATGGCGAATCTGGGGTTAAACCTTCCCCTCCTGACATGAATTCCAGAAAGAGAAAAACTTCTTCTAAGGGAAAACCCAAAGAAAATCCTCCCAAGGCTGCCGAAGCTAATGAAGATTCAAGTGCAAAACGAAGCAAGCCAAATGAAGGGGAAGGACATGAAAATGGTCAAGTGAAGGGAGAAGAAGAGTCAAAAGGAGGCAACAACAATGGAGGGGATGAGAAACAGAGCAAAAGCAGCAACTCAAAACCTCCTGAGCCTCCAAAGGACTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACAGATAGCCATAGTCTTGCTGAAAGAGTGAGAAGGGAGAAAATCAGTGAAAGAATGAAGCTTCTGCAAGATCTTGTACCTGGTTGCAACAAGGTCACTGGGAAAGCTCTTATGCTTGATGAAATCATAAACTATGTACAGTCATTGCAGCGTCAAGTTGAGTTCCTTTCTATGAAATTGTCCTCCGTGAACACCAGGCTTGATGTGAGCATTGACAATCTCATCTCAAAAGATATATTTCAATCAAATAACTCCTTGGCACACCAGGCAGCAATATTCCCCTTAGATTCCTCTGCCACAGCCTTTTTTGGCCCCAACCCAGCAATCCACAATACAATCCCTAATGGAACTGTGAACCACCCAATGGAATCTTTAGATTCTGCTCTCTGTCAAAGCCTTGGCTTCCAGTTACCATCTATGAATGGTTTCAATGAAGGTGCTTCTCAGTATCCAATGACTTTTTGTGAAGAGGACCTCCATGCCATTGTTCAGATGGGGTTTGGTCAAACAGAAAATAGAAAAACACCAACACAGTCTCCAAGCTATAATGGTTCAAGCCAGATATCCCATATGAAAGTTGAGCTCTGA 1635 0.4257 MENDFFLNGSALHFEPPSSSSPSLPTWHYLSSAAMDIPVSSDQPQQQQQDCFYNPSWEKSTIDHNHHHHALQFDSALSSMVSSPAASNSNLSNDNFVIRELIGKLGSIGNAGEISSYMNGNNNSTNTSCYSTPLSSPPKLNIPPPLMKDKLPMALNSSVAEFSADPGFAERAAKFSCFGSRSFNGRSSRQVGINNNADFTQRSSPLMENGKLSRVSSSPSLKALGSQMENKNSPLNSQEESTISEQNPNGESGVKPSPPDMNSRKRKTSSKGKPKENPPKAAEANEDSSAKRSKPNEGEGHENGQVKGEEESKGGNNNGGDEKQSKSSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDVSIDNLISKDIFQSNNSLAHQAAIFPLDSSATAFFGPNPAIHNTIPNGTVNHPMESLDSALCQSLGFQLPSMNGFNEGASQYPMTFCEEDLHAIVQMGFGQTENRKTPTQSPSYNGSSQISHMKVEL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01507 544 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 398 IPR011598 GO:0046983
Accr7g01507 544 MobiDBLite consensus disorder prediction 260 317 - -
Accr7g01507 544 Coils Coil 395 415 - -
Accr7g01507 544 MobiDBLite consensus disorder prediction 520 544 - -
Accr7g01507 544 Pfam Helix-loop-helix DNA-binding domain 352 399 IPR011598 GO:0046983
Accr7g01507 544 Gene3D - 345 421 IPR036638 GO:0046983
Accr7g01507 544 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 234 441 IPR024097 GO:0006355
Accr7g01507 544 FunFam Basic helix-loop-helix transcription factor 345 417 - -
Accr7g01507 544 MobiDBLite consensus disorder prediction 186 339 - -
Accr7g01507 544 MobiDBLite consensus disorder prediction 186 253 - -
Accr7g01507 544 MobiDBLite consensus disorder prediction 318 332 - -
Accr7g01507 544 SMART finulus 354 404 IPR011598 GO:0046983
Accr7g01507 544 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 346 416 IPR036638 GO:0046983
Accr7g01507 544 CDD bHLH_AtBPE_like 338 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01507 Accr-Chr7 41673400 41676084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01507 1 498 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 46.979 7.97e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr7g01507 HLH 4.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01507 - - gmx:100812081 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g01507 7 41673400 41676084 Accr6g01402 6 44081645 44084219 CCT