Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01424 ATGCCGCTAAAGCTCGATCCTTGCCAGGTCGTGGACGTCTTTGTTCGAGTGACGGGCGGTGAGGTTGGTGTGCGGCCAACGATTGGTCCCCTGGATCTTTCTCCAAAGAAGATCGGTGAAGACATAGCCAAGGAGACCGCAAACGACTGGAAGGGTCTACGGGTCACTGTAAAGCTAACTTTTCAGAACCGGCAGGCCAAGGTGTCGGTGGTCATTGAGATTGCCAGAACTATGCAGCCCAGATCCATGGACAAGGATTTCAGCGAAACCCTAAAGGAGATTCTCGAAACTTGTGTTTCTGTTGGATTCACTGTGGACGGCAAGGACCCTAAGGATCTACAGCAGGAGATAATCGACGAAGATGTTGAAATCGATCTGATTCTAGTAATTCAAATTGAGCTCATGCTTTATTAG 414 0.4903 MPLKLDPCQVVDVFVRVTGGEVGVRPTIGPLDLSPKKIGEDIAKETANDWKGLRVTVKLTFQNRQAKVSVVIEIARTMQPRSMDKDFSETLKEILETCVSVGFTVDGKDPKDLQQEIIDEDVEIDLILVIQIELMLY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01424 137 PANTHER 60S RIBOSOMAL PROTEIN L12 1 70 IPR000911 GO:0003735|GO:0005840|GO:0006412
Accr7g01424 137 FunFam Uncharacterized protein 91 125 - -
Accr7g01424 137 Pfam Ribosomal protein L11, N-terminal domain 15 65 IPR020784 -
Accr7g01424 137 SMART rl11c 13 106 IPR000911 GO:0003735|GO:0005840|GO:0006412
Accr7g01424 137 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 1 71 IPR036796 -
Accr7g01424 137 SUPERFAMILY Ribosomal protein L11, C-terminal domain 68 110 IPR036769 -
Accr7g01424 137 Gene3D - 1 79 IPR036796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01424 Accr-Chr7 39111384 39111797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01424 1 124 Cytoplasmic Ribosomal Protein Gene Family AT2G37190 58.282 3.17e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01424 K02870 - qsa:O6P43_010298 164.081