Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01419 ATGGTTGATATTGAGGAAGAAGAAGACAAACAATTATATTTCAGAAGAGGTTGGAACACATTTGTGCAAGATAATGATTTAGAATTTGGGGATTTTATAGTTTTCAAATTTGATGGGAATTCAACATTCAAAGCTAAAATCTATGAAAAATCTTACCTCAGAAGAAAAAAAACCTCAATGTCAGTATCTTCTTTCTTCAAGATCATCATCAATGAAGAATATACTACCAAACTGCGAATCCCTTTGTTGTTCGTCTCCAGATATTCTAGTCTAGTCCCAAAAACAGTAAAATTTATCAGGTCTTATTCTTCAGACAGATCATGGAAGGTTGATATTGTGGAAGAAGATGACAAAAGGTTATATTATAAAAATGGCTGGAGTACATTTGTAGAAGATAATGCTGTAGAGATTGCATCTTTTATAGTTTTCAAATTTGTTGGGGATTCAACTTTTAAAGTTAAGATCTATGGAAAGTGTGCCTGTGAGAAGGAGCTTGAGAATGAGTCATGTGTCAACCATGATTACTGCATACAGCATCATAATAAAAAAATACCAACTCTAGATCATCAAGTAACTAAGAGAGAAATAGATCCGATTGATGTAAGATACGTAACGATGGAGACAGTTGATCATGGCGATTCTAACCAAGAAATTGTGGCTCCCCAGAAAGAAGTTGAATCTCATGTCCCTATCGAGAAAACTGCAGACAATGGGTATGAGTCGATTGAAGGCCCTGATTTGGACTCTAAGAAGAATCCTTCATTCAAAATTCTTCTGCAACAAGCCTATGCAAAGAAGGGTGTCATGTGCTTTCCAACAGAGTTTTTCCATAAGCATATGAAGAATAAGAGACAAGAGGTAGAGATGGAGACAGTGGAAGGAGTGTGGACTGTGAGCTTACTCCCCCACATGAAAAGGACAAGGACATTCGCCAGATTAAGCAAAGGCTGGTCGGAATTCGCGAAAGCCAACCATTTCAAAACCGGAGAGACTCTTGTTTTCGAACTGACTCGAAAAGGTGACTGCCCCAAGTTTGTCATCAACAGGCAATGA 1053 0.3751 MVDIEEEEDKQLYFRRGWNTFVQDNDLEFGDFIVFKFDGNSTFKAKIYEKSYLRRKKTSMSVSSFFKIIINEEYTTKLRIPLLFVSRYSSLVPKTVKFIRSYSSDRSWKVDIVEEDDKRLYYKNGWSTFVEDNAVEIASFIVFKFVGDSTFKVKIYGKCACEKELENESCVNHDYCIQHHNKKIPTLDHQVTKREIDPIDVRYVTMETVDHGDSNQEIVAPQKEVESHVPIEKTADNGYESIEGPDLDSKKNPSFKILLQQAYAKKGVMCFPTEFFHKHMKNKRQEVEMETVEGVWTVSLLPHMKRTRTFARLSKGWSEFAKANHFKTGETLVFELTRKGDCPKFVINRQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01419 350 ProSiteProfiles B3 DNA-binding domain profile. 63 159 IPR003340 GO:0003677
Accr7g01419 350 CDD B3_DNA 255 349 IPR003340 GO:0003677
Accr7g01419 350 SUPERFAMILY DNA-binding pseudobarrel domain 60 160 IPR015300 -
Accr7g01419 350 CDD B3_DNA 9 48 IPR003340 GO:0003677
Accr7g01419 350 Gene3D - 240 349 IPR015300 -
Accr7g01419 350 PANTHER B3 DOMAIN-CONTAINING 3 54 - -
Accr7g01419 350 ProSiteProfiles B3 DNA-binding domain profile. 1 51 IPR003340 GO:0003677
Accr7g01419 350 SMART B3_2 65 159 IPR003340 GO:0003677
Accr7g01419 350 SMART B3_2 255 349 IPR003340 GO:0003677
Accr7g01419 350 SUPERFAMILY DNA-binding pseudobarrel domain 9 51 IPR015300 -
Accr7g01419 350 Pfam B3 DNA binding domain 9 48 IPR003340 GO:0003677
Accr7g01419 350 Pfam B3 DNA binding domain 255 346 IPR003340 GO:0003677
Accr7g01419 350 Pfam B3 DNA binding domain 65 156 IPR003340 GO:0003677
Accr7g01419 350 ProSiteProfiles B3 DNA-binding domain profile. 254 350 IPR003340 GO:0003677
Accr7g01419 350 Gene3D - 57 161 IPR015300 -
Accr7g01419 350 Gene3D - 1 52 IPR015300 -
Accr7g01419 350 SUPERFAMILY DNA-binding pseudobarrel domain 250 346 IPR015300 -
Accr7g01419 350 CDD B3_DNA 64 156 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01419 Accr-Chr7 38998401 39000007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01419 65 347 REM Transcription Factor Family AT4G31640 23.264 1.47e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr7g01419 B3 7.4e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01419 - - pcin:129291410 484.182