LGRPv2

Gene search

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr7g01418	349	ProSiteProfiles	B3 DNA-binding domain profile.	63	159	IPR003340	GO:0003677
	Accr7g01418	349	Gene3D	-	1	52	IPR015300	-
	Accr7g01418	349	Gene3D	-	57	161	IPR015300	-
	Accr7g01418	349	SUPERFAMILY	DNA-binding pseudobarrel domain	60	160	IPR015300	-
	Accr7g01418	349	CDD	B3_DNA	9	48	IPR003340	GO:0003677
	Accr7g01418	349	Gene3D	-	241	348	IPR015300	-
	Accr7g01418	349	SMART	B3_2	65	159	IPR003340	GO:0003677
	Accr7g01418	349	SMART	B3_2	254	348	IPR003340	GO:0003677
	Accr7g01418	349	ProSiteProfiles	B3 DNA-binding domain profile.	1	51	IPR003340	GO:0003677
	Accr7g01418	349	SUPERFAMILY	DNA-binding pseudobarrel domain	9	51	IPR015300	-
	Accr7g01418	349	SUPERFAMILY	DNA-binding pseudobarrel domain	249	345	IPR015300	-
	Accr7g01418	349	CDD	B3_DNA	254	348	IPR003340	GO:0003677
	Accr7g01418	349	PANTHER	B3 DOMAIN-CONTAINING	3	54	-	-
	Accr7g01418	349	CDD	B3_DNA	64	156	IPR003340	GO:0003677
	Accr7g01418	349	ProSiteProfiles	B3 DNA-binding domain profile.	253	349	IPR003340	GO:0003677
	Accr7g01418	349	Pfam	B3 DNA binding domain	254	345	IPR003340	GO:0003677
	Accr7g01418	349	Pfam	B3 DNA binding domain	9	48	IPR003340	GO:0003677
	Accr7g01418	349	Pfam	B3 DNA binding domain	65	156	IPR003340	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr7g01418	Accr-Chr7	38998401	39000007	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr7g01418	65	346	REM Transcription Factor Family	AT4G31640	23.345	1.04e-10	60.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	B3	Accr7g01418		B3	7.3e-13	CL0405

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr7g01418	-		-	pcin:129291410	487.648