Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01417 ATGTCTTCCTTCTTCAGAGTCCTCGTTAGGGATTATACTGCTAAACTGATTAGTTCGGCCCCTGTTTTCCGATCTGCCATTGTACCAAACTGTGTTGGAAATTTTTGCATGATTGTGGTTTTGTGCTGTGTTTCTGTTTGTGATGCGTGGATGATTGTCCTGTGTATGCAAATCCCTCCCCTGTTTGTCTCCAGATTTTCTAGTCTTACACCAAAAACAGTAGTGCTTTTTTGTTCTTCAGAAAGATCATGGATGGTTGATATTGAGGAAGAAGAAGACAAACAATTATATTTCAGAAGAGGTTGGAACACATTTGTGCAAGATAATGATTTAGAATTTGGGGATTTTATAGTTTTCAAATTTGATGGGAATTCAACATTCAAAGCTAAAATCTATGAAAAATCTTACCTCAGAAGAAAAAAAACCTCAATGTCAGTATCTTCTTTCTTCAAGATCATCATCAATGAAGAATATACTACCAAACTGCGAATCCCTTTGTTGTTCGTCTCCAGATATTCTAGTCTAGTCCCAAAAACAGTAAAATTTATCAGGTCTTATTCTTCAGACAGATCATGGAAGGTTGATATTGTGGAAGAAGATGACAAAAGGTTATATTATAAAAATGGCTGGAGTACATTTGTAGAAGATAATGCTGTAGAGATTGCATCTTTTATAGTTTTCAAATTTGTTGGGGATTCAACTTTTAAAGTTAAGATCTATGGAAAGTGTGCCTGTGAGAAGGAGCTTGAGAATGAGTCATGTGTCAACCATGATTACTGCATACAGCATCATAATAAAAAAATACCAACTCTAGATCATCAAGTAACTAAGAGAGAAATAGATCCGATTGATGTAAGATACGTAACGATGGAGACAGTTGATCATGGCGATTCTAACCAAGAAATTGTGGCTCCCCAGAAAGAAGTTGAATCTCATGTCCCTATCGAGAAAACTGACAATGGGTATGAGTCGATTGAAGGCCCTGATTTGGACTCTAAGAAGAATCCTTCATTCAAAATTCTTCTGCAACAAGCCTATGCAAAGAAGGGTGTCATGTGCTTTCCAACAGAGTTTTTCCATAAGCATATGAAGAATAAGAGACAAGAGGTAGAGATGGAGACAGTGGAAGGAGTGTGGACTGTGAGCTTACTCCCCCACATGAAAAGGACAAGGACATTCGCCAGATTAAGCAAAGGCTGGTCGGAATTCGCGAAAGCCAACCATTTCAAAACCGGAGAGACTCTTGTTTTCGAACTGACTCGAAAAGGTGACTGCCCCAAGTTTGTCATCAACAGGCAATGA 1302 0.3817 MSSFFRVLVRDYTAKLISSAPVFRSAIVPNCVGNFCMIVVLCCVSVCDAWMIVLCMQIPPLFVSRFSSLTPKTVVLFCSSERSWMVDIEEEEDKQLYFRRGWNTFVQDNDLEFGDFIVFKFDGNSTFKAKIYEKSYLRRKKTSMSVSSFFKIIINEEYTTKLRIPLLFVSRYSSLVPKTVKFIRSYSSDRSWKVDIVEEDDKRLYYKNGWSTFVEDNAVEIASFIVFKFVGDSTFKVKIYGKCACEKELENESCVNHDYCIQHHNKKIPTLDHQVTKREIDPIDVRYVTMETVDHGDSNQEIVAPQKEVESHVPIEKTDNGYESIEGPDLDSKKNPSFKILLQQAYAKKGVMCFPTEFFHKHMKNKRQEVEMETVEGVWTVSLLPHMKRTRTFARLSKGWSEFAKANHFKTGETLVFELTRKGDCPKFVINRQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01417 433 SUPERFAMILY DNA-binding pseudobarrel domain 333 429 IPR015300 -
Accr7g01417 433 SUPERFAMILY DNA-binding pseudobarrel domain 144 244 IPR015300 -
Accr7g01417 433 SUPERFAMILY DNA-binding pseudobarrel domain 54 135 IPR015300 -
Accr7g01417 433 ProSiteProfiles B3 DNA-binding domain profile. 337 433 IPR003340 GO:0003677
Accr7g01417 433 PANTHER B3 DOMAIN-CONTAINING 34 138 - -
Accr7g01417 433 CDD B3_DNA 56 132 IPR003340 GO:0003677
Accr7g01417 433 ProSiteProfiles B3 DNA-binding domain profile. 147 243 IPR003340 GO:0003677
Accr7g01417 433 Pfam B3 DNA binding domain 338 429 IPR003340 GO:0003677
Accr7g01417 433 Pfam B3 DNA binding domain 56 132 IPR003340 GO:0003677
Accr7g01417 433 Pfam B3 DNA binding domain 149 240 IPR003340 GO:0003677
Accr7g01417 433 SMART B3_2 338 432 IPR003340 GO:0003677
Accr7g01417 433 SMART B3_2 42 135 IPR003340 GO:0003677
Accr7g01417 433 SMART B3_2 149 243 IPR003340 GO:0003677
Accr7g01417 433 CDD B3_DNA 338 432 IPR003340 GO:0003677
Accr7g01417 433 ProSiteProfiles B3 DNA-binding domain profile. 56 135 IPR003340 GO:0003677
Accr7g01417 433 CDD B3_DNA 148 240 IPR003340 GO:0003677
Accr7g01417 433 Gene3D - 51 136 IPR015300 -
Accr7g01417 433 Gene3D - 141 245 IPR015300 -
Accr7g01417 433 Gene3D - 326 432 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01417 Accr-Chr7 38998401 39001169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01417 149 249 B3 DNA Binding Superfamily AT5G66980 29.808 4.00e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr7g01417 B3 1.1e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01417 - - pcin:129291410 533.487