Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01414 ATGGAGACAGTTGATCATGGCGATTCTAACCAAGAAATTGTGGCTCCCCAGAAAGAAGTTGAATCTCATGTCCCTATCGAGAAAACTGACAATGGGTATGAGTCGATTGAAGGCCCTGATTTGGACTCTAAGAAGAATCCTTCATTCAAAATTCTTCTGCAACAAGCCTATGCAAAGAAGGGTGTCATGTGCTTTCCAACAGAGTTTTTCCATAAGCATATGAAGAATAAGAGACAAGAGGTAGAGATGGAGACAGTGGAAGGAGTGTGGACTGTGAGCTTACTCCCCCACATGAAAAGGACAAGGACATTCGCCAGATTAAGCAAAGGCTGGTCGGAATTCGCGAAAGCCAACCATTTCAAAACCGGAGAGACTCTTGTTTTCGAACTGACTCGAAAAGGTGACTGCCCCAAGTTTGTCATCAACAGGCAATGA 435 0.4414 METVDHGDSNQEIVAPQKEVESHVPIEKTDNGYESIEGPDLDSKKNPSFKILLQQAYAKKGVMCFPTEFFHKHMKNKRQEVEMETVEGVWTVSLLPHMKRTRTFARLSKGWSEFAKANHFKTGETLVFELTRKGDCPKFVINRQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01414 144 SUPERFAMILY DNA-binding pseudobarrel domain 44 140 IPR015300 -
Accr7g01414 144 Gene3D - 35 143 IPR015300 -
Accr7g01414 144 Pfam B3 DNA binding domain 49 140 IPR003340 GO:0003677
Accr7g01414 144 MobiDBLite consensus disorder prediction 21 41 - -
Accr7g01414 144 SMART B3_2 49 143 IPR003340 GO:0003677
Accr7g01414 144 CDD B3_DNA 49 143 IPR003340 GO:0003677
Accr7g01414 144 MobiDBLite consensus disorder prediction 1 41 - -
Accr7g01414 144 ProSiteProfiles B3 DNA-binding domain profile. 48 144 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01414 Accr-Chr7 38970104 38971010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01414 46 135 B3 DNA Binding Superfamily AT3G18990 31.868 3.73e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr7g01414 B3 9.2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01414 - - pcin:129291410 206.068