Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01413 ATGTCTTCCTTCTTTGAAGTCCTCAACGGGGAATATACTGCTAAATTGCGGATCCCTCCCTTGTTTGTCTCCAGATTTTCTAGTCTGATGCCAAAAACAGTAAAACTAATATCTTCTTTAGAAGGATCATGGATGGTTGATATTGAGGAGGAAGATAACAAAAATTTGTATTTTAAAAGAGGTTGGAATACATTTGTAGAAGATAATGCTTTAGAAACTGGGCAGTTTATAGTTTTCAAATTCGATGGGGATTCAACATTTAAAGCTACAATCTTTGGAAACTCTGCCTGCGAGAAGAAGCTTGAGAATCAGCCATGTATCAATTCGAATTACTGCATAACACGACATCATAATAAACGAGCAAGAACTCTAGAAGAGAGTGATCCAACTAAAGTTGAAGAAACTGAAGAGAGTGATCCAACTAAAGTTGAAGAAACTGAGGAGAGTGATCCAACTGAAGTTGAAGAAACTGAGGCTTCCCAGAATGAAGTTGAAGAAAAAAACTACGAATCTGATAGCCCTGTCAAGAAAACTGCAGGCAATAGTTATGGGTCTTGTGAAAGCCCTGATTCAGACTGTGAGAAGAATCCTTCATTCAAAATTATTATGAAACCAGCCTATGCACAAAAGGGTGTCATGAACCTCCCAACAGAGTTCTTTCTGAAGCATATGAAAAATAAGAGACAAGAGGTAGAGATTGAGACAGGGGAAGGAGAATGGACTGTGACCCTACTCACCCAAAAGAAAAGGACAAGAACATTTGCTAGATTAAGCAAAGGTTGGTCGGATTTCGCCAAAGCGAACCATCTCAAACCCGGGGAGACTCTCGTTTTTCAAATGATTCGGAAAGGTGATCGTCCCAGGTTTATTGTTCATAGGCAACGGGGTTAG 891 0.3951 MSSFFEVLNGEYTAKLRIPPLFVSRFSSLMPKTVKLISSLEGSWMVDIEEEDNKNLYFKRGWNTFVEDNALETGQFIVFKFDGDSTFKATIFGNSACEKKLENQPCINSNYCITRHHNKRARTLEESDPTKVEETEESDPTKVEETEESDPTEVEETEASQNEVEEKNYESDSPVKKTAGNSYGSCESPDSDCEKNPSFKIIMKPAYAQKGVMNLPTEFFLKHMKNKRQEVEIETGEGEWTVTLLTQKKRTRTFARLSKGWSDFAKANHLKPGETLVFQMIRKGDRPRFIVHRQRG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01413 296 CDD B3_DNA 197 293 IPR003340 GO:0003677
Accr7g01413 296 MobiDBLite consensus disorder prediction 120 194 - -
Accr7g01413 296 SUPERFAMILY DNA-binding pseudobarrel domain 3 97 IPR015300 -
Accr7g01413 296 PANTHER B3 DOMAIN-CONTAINING 3 284 - -
Accr7g01413 296 MobiDBLite consensus disorder prediction 120 138 - -
Accr7g01413 296 Pfam B3 DNA binding domain 199 293 IPR003340 GO:0003677
Accr7g01413 296 Pfam B3 DNA binding domain 13 90 IPR003340 GO:0003677
Accr7g01413 296 Gene3D - 184 295 IPR015300 -
Accr7g01413 296 CDD B3_DNA 3 92 IPR003340 GO:0003677
Accr7g01413 296 SMART B3_2 4 95 IPR003340 GO:0003677
Accr7g01413 296 SMART B3_2 199 295 IPR003340 GO:0003677
Accr7g01413 296 ProSiteProfiles B3 DNA-binding domain profile. 1 95 IPR003340 GO:0003677
Accr7g01413 296 Gene3D - 1 97 IPR015300 -
Accr7g01413 296 ProSiteProfiles B3 DNA-binding domain profile. 198 295 IPR003340 GO:0003677
Accr7g01413 296 MobiDBLite consensus disorder prediction 174 192 - -
Accr7g01413 296 MobiDBLite consensus disorder prediction 139 160 - -
Accr7g01413 296 SUPERFAMILY DNA-binding pseudobarrel domain 195 292 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01413 Accr-Chr7 38958773 38961060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01413 15 285 B3 DNA Binding Superfamily AT3G18990 25.472 1.04e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr7g01413 B3 2.5e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01413 - - pcin:129291410 316.62