Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01412 ATGTCTTCCTTCTTTGAAGTCCTCAACGGGGAATATACTGCTAAATTGCGGATCCCTCCCTTGTTTGTCTCCAGATTTTCTAGTCTGATGCCAAAAACAGTAAAACTAATATCTTCTTTAGAAGGATCATGGATGGTTGATATTGAGGAGGAAGATAACAAAAATTTGTATTTTAAAAGAGGTTGGAATACATTTGTAGAAGATAATGCTTTAGAAACTGGGCAGTTTATAGTTTTCAAATTCGATGGGGATTCAACATTTAAAGCTACAATCTTTGGAAACTCTGCCTGCGAGAAGAAGCTTGAGAATCAGCCATGTATCAATTCGAATTACTGCATAACACGACATCATAATAAACGAGCAAGAACTCTAGAAGAGAGTGATCCAACTAAAGTTGAAGAAACTGAAGAGAGTGATCCAACTAAAGTTGAAGAAACTGAGGAGAGTGATCCAACTGAAGTTGAAGAAACTGAGGCTTCCCAGAATGAAGTTGAAGAAAAAAACTACGAATCTGATAGCCCTGTCAAGAAAACTGGCAATAGTTATGGGTCTTGTGAAAGCCCTGATTCAGACTGTGAGAAGAATCCTTCATTCAAAATTATTATGAAACCAGCCTATGCACAAAAGGGTGTCATGAACCTCCCAACAGAGTTCTTTCTGAAGCATATGAAAAATAAGAGACAAGAGGTAGAGATTGAGACAGGGGAAGGAGAATGGACTGTGACCCTACTCACCCAAAAGAAAAGGACAAGAACATTTGCTAGATTAAGCAAAGGTTGGTCGGATTTCGCCAAAGCGAACCATCTCAAACCCGGGGAGACTCTCGTTTTTCAAATGATTCGGAAAGGTGATCGTCCCAGGTTTATTGTTCATAGGCAACGGGGTTAG 888 0.3941 MSSFFEVLNGEYTAKLRIPPLFVSRFSSLMPKTVKLISSLEGSWMVDIEEEDNKNLYFKRGWNTFVEDNALETGQFIVFKFDGDSTFKATIFGNSACEKKLENQPCINSNYCITRHHNKRARTLEESDPTKVEETEESDPTKVEETEESDPTEVEETEASQNEVEEKNYESDSPVKKTGNSYGSCESPDSDCEKNPSFKIIMKPAYAQKGVMNLPTEFFLKHMKNKRQEVEIETGEGEWTVTLLTQKKRTRTFARLSKGWSDFAKANHLKPGETLVFQMIRKGDRPRFIVHRQRG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01412 295 PANTHER B3 DOMAIN-CONTAINING 3 283 - -
Accr7g01412 295 Gene3D - 1 97 IPR015300 -
Accr7g01412 295 Pfam B3 DNA binding domain 198 292 IPR003340 GO:0003677
Accr7g01412 295 Pfam B3 DNA binding domain 13 90 IPR003340 GO:0003677
Accr7g01412 295 MobiDBLite consensus disorder prediction 174 191 - -
Accr7g01412 295 CDD B3_DNA 196 292 IPR003340 GO:0003677
Accr7g01412 295 MobiDBLite consensus disorder prediction 120 138 - -
Accr7g01412 295 MobiDBLite consensus disorder prediction 120 192 - -
Accr7g01412 295 ProSiteProfiles B3 DNA-binding domain profile. 197 294 IPR003340 GO:0003677
Accr7g01412 295 CDD B3_DNA 3 92 IPR003340 GO:0003677
Accr7g01412 295 SMART B3_2 4 95 IPR003340 GO:0003677
Accr7g01412 295 SMART B3_2 198 294 IPR003340 GO:0003677
Accr7g01412 295 ProSiteProfiles B3 DNA-binding domain profile. 1 95 IPR003340 GO:0003677
Accr7g01412 295 SUPERFAMILY DNA-binding pseudobarrel domain 3 97 IPR015300 -
Accr7g01412 295 SUPERFAMILY DNA-binding pseudobarrel domain 194 291 IPR015300 -
Accr7g01412 295 Gene3D - 184 294 IPR015300 -
Accr7g01412 295 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01412 Accr-Chr7 38958773 38961060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01412 15 284 B3 DNA Binding Superfamily AT3G18990 25.157 1.59e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr7g01412 B3 2.5e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01412 - - pcin:129291410 319.316