Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01411 ATGTCTCGTTATTTCTTCAGAGTCCTCATCGGAGAGTGGAAGACTAAACTGCGAATCCCTCGGCTGTTTGTCTTCAGTTTTAGTCTTACACCTAGGACAGTAATACTCATAAATGGTTCTTCAAAAAATCTATGGAAGGTTGATATGGAGCAAGTAGAAAAAGATCCCACAGAATTATACTTTAGAAAGGGTTGGTCTAGATTTGTAAGAGAAAACGATTTGATGGCTGCAGATTTCCTCATCTTCAAGTTTGATGGGAATTCAACTTTCAAAGTTGTTATCTGTGGCAAATCTGCTTGCGAAAAAATGCTTGAGAGCCAGGCAAGAACACAAACTAATCAGAAAAAGAATGTTGGAGAGAATCGGAAAGCAAAAGATCCGATTCTTGTTGAGATAAAGGAAGAGAAATTAGATTTGGTTGATTCTGGAAATTCTAGCGAAGAAACATGGGATGAAACGTGGGATGAGAAAGAAGAAGATGAAGAAGAAGATGAACAACAAGAATATGGTGATATTAATTCTGGACCTCGTGATACTATCATGAATACTGGTGAAGGAAGCAGCTTGGCCATTATTCCTTCATTCAAAATAAAGCTCCAGCTTGCCTCCGCAAAAAGGGGCGTCATGTGCATTCCAACTGACTTCTTCAAGAAGTACATGAGAAGGAAGAAACATGAGGTGGAGATGGAGACAGTGAAAGGAGTATGGAAAGTAACATCACTTCCCCACCTGAAAAGAGGTCAAATGTTTGCAAGGTTCAGCAGGGGTTGGTCGGGATTTGCCCGGAGGAATCGGTTTCAGGCCGGAGAGACTCTCCTTTTTAGAATGATTCAAAGAGGTGATCGTCCCAAGTTCATTGTTAGTAAGGAATAA 873 0.4044 MSRYFFRVLIGEWKTKLRIPRLFVFSFSLTPRTVILINGSSKNLWKVDMEQVEKDPTELYFRKGWSRFVRENDLMAADFLIFKFDGNSTFKVVICGKSACEKMLESQARTQTNQKKNVGENRKAKDPILVEIKEEKLDLVDSGNSSEETWDETWDEKEEDEEEDEQQEYGDINSGPRDTIMNTGEGSSLAIIPSFKIKLQLASAKRGVMCIPTDFFKKYMRRKKHEVEMETVKGVWKVTSLPHLKRGQMFARFSRGWSGFARRNRFQAGETLLFRMIQRGDRPKFIVSKE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01411 290 Gene3D - 1 100 IPR015300 -
Accr7g01411 290 CDD B3_DNA 193 289 IPR003340 GO:0003677
Accr7g01411 290 MobiDBLite consensus disorder prediction 139 178 - -
Accr7g01411 290 ProSiteProfiles B3 DNA-binding domain profile. 2 98 IPR003340 GO:0003677
Accr7g01411 290 CDD B3_DNA 3 95 IPR003340 GO:0003677
Accr7g01411 290 ProSiteProfiles B3 DNA-binding domain profile. 194 290 IPR003340 GO:0003677
Accr7g01411 290 Pfam B3 DNA binding domain 195 283 IPR003340 GO:0003677
Accr7g01411 290 Pfam B3 DNA binding domain 16 96 IPR003340 GO:0003677
Accr7g01411 290 MobiDBLite consensus disorder prediction 148 169 - -
Accr7g01411 290 SUPERFAMILY DNA-binding pseudobarrel domain 3 100 IPR015300 -
Accr7g01411 290 SUPERFAMILY DNA-binding pseudobarrel domain 193 286 IPR015300 -
Accr7g01411 290 SMART B3_2 5 98 IPR003340 GO:0003677
Accr7g01411 290 SMART B3_2 195 290 IPR003340 GO:0003677
Accr7g01411 290 Gene3D - 183 289 IPR015300 -
Accr7g01411 290 PANTHER B3 DOMAIN-CONTAINING 3 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01411 Accr-Chr7 38935870 38938073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01411 2 285 REM Transcription Factor Family AT4G31640 22.069 2.34e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr7g01411 B3 1.8e-09 CL0405