Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01410 ATGGAGCAAGTAGAAGAAGATCCCACAGAATTATACTTTAAAAAGGGTTGGTCTAACTTTGTGAAAGACAACTCTTTGGTGGCTGAAGATTTACTGATTTTCAAGTTTGATGGGAATTCAACTTTCAAAATTGTAATCTGTGGCAAATCTGCCTGCGATAAGATGCTTGAGAGCCAGTCAAGAACGCAAACAAATCAGAAAATAGATTTGGTAGATTCTGGAAATTCCAACCAAGAAACATGGGTTGAGAAAGAAGAAGATGATGAAGAAGAACAAGAACAAGGAGAAGAAGAAAGTGACAAGTTTGATGACATTAAATCTGAACCTGATGATACTACCATGAATATTGGGGAAGGAAGCAGCTTGGCCATTATTCCTTCATTCAGAATAAAGCTCCAGCTTGCCTCCGTAAAAAGGGGTGTCATGTGCATTCCAACTGACTTCTTCAAGAAGTACATGAGAAAGAAGAAACAGGAGGTGGATATGGAGACCGGCAAAGGAGTATGGAAAGTGACATCACTTCCCCACCTGAAAAGAGGTCAAATGTTTGCAAGGTTCAGCAGGGGTTGGTCTGAATTCGCCCGAAAGAATCGGTTTCAGGTTGGAGAGACTCTTCTTTTTAGAATGATTCAGAGAGATCATCATCCCAAGTTCATTGTTAGTAAGGAATAA 672 0.3988 MEQVEEDPTELYFKKGWSNFVKDNSLVAEDLLIFKFDGNSTFKIVICGKSACDKMLESQSRTQTNQKIDLVDSGNSNQETWVEKEEDDEEEQEQGEEESDKFDDIKSEPDDTTMNIGEGSSLAIIPSFRIKLQLASVKRGVMCIPTDFFKKYMRKKKQEVDMETGKGVWKVTSLPHLKRGQMFARFSRGWSEFARKNRFQVGETLLFRMIQRDHHPKFIVSKE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01410 223 MobiDBLite consensus disorder prediction 63 78 - -
Accr7g01410 223 Pfam B3 DNA binding domain 7 47 IPR003340 GO:0003677
Accr7g01410 223 Pfam B3 DNA binding domain 133 216 IPR003340 GO:0003677
Accr7g01410 223 SUPERFAMILY DNA-binding pseudobarrel domain 7 55 IPR015300 -
Accr7g01410 223 MobiDBLite consensus disorder prediction 82 98 - -
Accr7g01410 223 SUPERFAMILY DNA-binding pseudobarrel domain 126 219 IPR015300 -
Accr7g01410 223 Gene3D - 90 222 IPR015300 -
Accr7g01410 223 SMART B3_2 128 223 IPR003340 GO:0003677
Accr7g01410 223 ProSiteProfiles B3 DNA-binding domain profile. 127 223 IPR003340 GO:0003677
Accr7g01410 223 CDD B3_DNA 4 47 IPR003340 GO:0003677
Accr7g01410 223 MobiDBLite consensus disorder prediction 63 114 - -
Accr7g01410 223 ProSiteProfiles B3 DNA-binding domain profile. 1 50 IPR003340 GO:0003677
Accr7g01410 223 PANTHER B3 DOMAIN-CONTAINING 9 212 - -
Accr7g01410 223 CDD B3_DNA 126 222 IPR003340 GO:0003677
Accr7g01410 223 Gene3D - 2 52 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01410 Accr-Chr7 38906470 38907972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01410 16 218 REM Transcription Factor Family AT4G31640 21.569 1.35e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr7g01410 B3 1.8e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01410 - - pcin:129290266 197.208