Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01391 ATGAGCTCTAACTTGAAGAAACTCAAAGATGAAGAAGCAGAAGATAACGTACTGCTACATCAAAGCGAGACAATACCATTATCATCGCCGCCCTCACACGGGTTCTTGGAGCCACCATGGCTCTCCCATGTGGAGGAGGACAAGGGCGAGGAAGAAGATGTCGTGTATTCAGACAAGGTGAAAGTGCAGATATTTGTCTCAGAGTCTTCTTCCAACAACTCCACCACGGCGGTGCCACCATTCTCGTGGCGGAAGTTGTGGCTGTTTACGGGGCCGGGGCTGTTGATGAGCGTGGCGTTTTTGGACCCTGGGAATTTGGAAGGTGATTTGCAGGCAGGAGCCATTGCAGGGTACTCGTTGTTGTGGCTTTTGATGTGGACGACGATCATGGGGCTTCTGATACAGCTGTTGTCGGCTAGGCTCGGGGTGGCATCCGGGCGGCACTTGGCGGAGCTGTGCCGGGAAGAGTACACCAAGTGGGCGAGGTTGGTGTTGTATGTGATGGCGGAAATGGCATTGATAGCTGCAGATATTCAAGAGGTTATTGGTAGCGCCATAGCCATTAAGATTCTAAGTCATGGCATTTTGCCCATTTGGGCTGGAGTTGTAATCACAGCCCTGGATAGTTTTATGTTCCTGTTTCTCGAGAACTATGGAGTGAGGAAGTTGGAAGGTGTTTTCGCAATATTCATTGGAACTATGGCCCTTTCTTTTGCTTGGATGTTCTTTGAGACAAAACCTAGTCCTAAACAACTTCTTATAGGTATTTTGGTCCCAAAAGTAAGCTCAAAAACTCTTCGTCAAGCTGTGGAACTTATAGGCTGTGTTATAACCCCACACAACGTATTCCTGCACTCAGCCCTAGTTCAATCCAGAGACATAGACATACAAAACAAAAGCCAGGTCCAAGAAGCTCTAAACTACTACACAATCGAGTCCACACTCGCACTTACCATCACCTTTTTCATCAACCTCTCGGTCATGACCGTCTTCGCTAAGGTTTTCTACGGCAACACTGAACAAGCTGACACCATCGGACTCGTAAACGCCGGCCAGTATCTTCAAGAGAAATATGGCGGAGGGTTCTTCCCTATATTGTATATATGGGGAGTAGGGTTGCTGGCGGCCGGACAAAGTAGTACTATCACTGGTACTTATGCTGGGCAGTTTATTACAGAAGGGTTTCTGAAACTGCGTTTGAAGAAATGGTTAAGAGCTTTGATCACTAGAAGCCTAGCCATTGTTCCTACCATGATTGTGGCTGTTGTGTTTAATACTTCTGAAGGTTCTTTGGATACTTTGAATGAGTGGCTTAATGTGGTTCAGTCTATTCAGATTCCTTTTGCTCTTATTCCTCTTCTTACGTTGGTGTCTAAAGAGGAGGTCATGGGAACTTTCAGAATTGGGCCTCTGGTGGAGAAAGTTGCATGGACAGTGGCAGTGGTGGTAATTCTGGTATATGGATACATGTTGCTGGACTTCTTTCTGTCAGAAGTGAAGGGACTTGTGTATGGCTTTGTGGTGATGATTTGTGCAGCTGCTTGGTTATCATTCATTGCTTATTTGGTTAAACACAGTGGTGCTTTCTCTTCTTTCTTCCACACTTCTCTTCATTCTCGTGGGTTCTCCTCTCTTTCTCCCAATTAG 1647 0.4627 MSSNLKKLKDEEAEDNVLLHQSETIPLSSPPSHGFLEPPWLSHVEEDKGEEEDVVYSDKVKVQIFVSESSSNNSTTAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWTTIMGLLIQLLSARLGVASGRHLAELCREEYTKWARLVLYVMAEMALIAADIQEVIGSAIAIKILSHGILPIWAGVVITALDSFMFLFLENYGVRKLEGVFAIFIGTMALSFAWMFFETKPSPKQLLIGILVPKVSSKTLRQAVELIGCVITPHNVFLHSALVQSRDIDIQNKSQVQEALNYYTIESTLALTITFFINLSVMTVFAKVFYGNTEQADTIGLVNAGQYLQEKYGGGFFPILYIWGVGLLAAGQSSTITGTYAGQFITEGFLKLRLKKWLRALITRSLAIVPTMIVAVVFNTSEGSLDTLNEWLNVVQSIQIPFALIPLLTLVSKEEVMGTFRIGPLVEKVAWTVAVVVILVYGYMLLDFFLSEVKGLVYGFVVMICAAAWLSFIAYLVKHSGAFSSFFHTSLHSRGFSSLSPN 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01391 548 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 72 524 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 PRINTS Natural resistance-associated macrophage protein signature 165 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 PRINTS Natural resistance-associated macrophage protein signature 195 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 PRINTS Natural resistance-associated macrophage protein signature 405 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 PRINTS Natural resistance-associated macrophage protein signature 269 292 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 PRINTS Natural resistance-associated macrophage protein signature 439 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 PRINTS Natural resistance-associated macrophage protein signature 377 396 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 PRINTS Natural resistance-associated macrophage protein signature 220 241 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 Hamap Divalent metal cation transporter MntH [mntH]. 74 495 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 Pfam Natural resistance-associated macrophage protein 107 469 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 84 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr7g01391 548 NCBIfam Nramp family divalent metal transporter 91 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01391 Accr-Chr7 37948575 37952036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01391 51 526 Inorganic Solute Cotransporters AT1G47240 72.956 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01391 K21398 - gmx:100801411 813.142