Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01387 ATGTTAATGCAGAGTTCTCTTCCTAGTTCAATTGAAGCTGCTATATTTCATGTATCTGATAAAGGGAAGGAAGATGCTCTATGTGACTGGATGCCTAGTGCTGAAACTTGGCAGGTGTGCCTGAAATGCAAAAAATACCCTCTTTACTGCTGCAGAAAAGTTGAAGCAATGCAAAAACAAGAGGATAGAAGGAATGATGATGTTCCATGCTACAGAAAAGTTGAAGCAGAGCAAGAGGATAGAAGCAATGATGAAGTTCCATACTGCAGAAAAGTTGAAGCAATGCAAGAGCATGAGGATAGAAGGAATGATGACATTCGGTGCTGCAGAAAAGTTGAAGCAATGCAAGAGGTAGAGGATAGAAACAATGAAGATGTTCCATGCAGCTCAAACTGCATAAGCAGCTTAGGTCGACCATCAGCTGCCAGTTCAATTACTAGAAGTAGTGTGCCAAATCTAGTTTACAAGAGAAAACGTAAGCGTTCAACCACACCCCTTTTAAAAATAGGACCTATGTCTGTGCCAGCAAGTGCCAATTGCCCTTCATTTATTAGCCCCTGTGCTGATAGATCATCATTGGAGCATCAGCCAGCCAGCTCTCAAGTTGAGCAAGATATTGAAATGGTTAAAGACCCTGTTGCACCCATTGTCTTATGTGAAACAGCAATAGATAACAGCAGACCTAAAAATTTAGGAATTGACAGCATTAATGATAGTTGTTCCACATCAAAATCAATTATGGAAATTGTTTCAAATTCCAAAGAAACTGGAGTAGATGACACTGGCGAATGCTCCTCTTCTAGTGTATTAGTCATGGATGGTCCTAGAGAAGACCTATCAGCAAGGGATTTCTGCATCAAAGTTCTAAGAAGCCATGGACTCCTTGGAGGGGGTTCTTATGCTGATACTGTAGCTTCTCAAGAACAGGCTGCTTCCTCTGGTGATAGTTTCAGTTCCCGGTCATGCAAAATATGTGGCAATTCAGGTGGCTCATTGAACATGCTCATATGTGATCATTGTGAAGAGGCATATCATCCATCCTGCATCATTCCGCGTATGAAGAAGTTACCAATTGATGAATGGTTTTGTCATTCATGTATAAAAAAGAAGCAAAAAATTCTTAGGGAGAAGATTATTAAAAGTTCGCCAACTATCAACAGTGAAATGGAATTATGCAGATCTTCCTCAGCTAATGGAGGATTGAATCCTATACTGGTGATGTTGAATGATTCTGGGCCAAGTACAACTGGTGTACGGGTTGGTAAAGGTTTTCAAGCGGAAGTTCCTGAATGGTCAGGTCCAATAGGAAGTGATGATGCTTGTGCTGAACTGTTGGAAATTGATTCTTCAGAATTTTCCAGTTTTCAGGAAAAGAATCTCAAAAGGTCAACCAGAATCAGCCCCATTTGTAATTGGCTTCAGTGTCAGGAGGTTGTAGATAGAGCCAAAGGAACTATATGTGGGAAATGGCGCAGGGCTCCTATTTTTGAAGTCCAAACTGATAAATGGGAGTGCTTCTGTGCCATCCATTGGGATCCAGCTCATGCTGATTGTGCGGCACCTCAGGAGTCAGAAACAGATCAAATTCTGAAGGAACTAAAGCATGTAGAATTGTTGAGGACGCGACTAGCCGCGAAACGTTCAAAATGCTCCGGCAAAAAGGGTGGCCAATGA 1674 0.4164 MLMQSSLPSSIEAAIFHVSDKGKEDALCDWMPSAETWQVCLKCKKYPLYCCRKVEAMQKQEDRRNDDVPCYRKVEAEQEDRSNDEVPYCRKVEAMQEHEDRRNDDIRCCRKVEAMQEVEDRNNEDVPCSSNCISSLGRPSAASSITRSSVPNLVYKRKRKRSTTPLLKIGPMSVPASANCPSFISPCADRSSLEHQPASSQVEQDIEMVKDPVAPIVLCETAIDNSRPKNLGIDSINDSCSTSKSIMEIVSNSKETGVDDTGECSSSSVLVMDGPREDLSARDFCIKVLRSHGLLGGGSYADTVASQEQAASSGDSFSSRSCKICGNSGGSLNMLICDHCEEAYHPSCIIPRMKKLPIDEWFCHSCIKKKQKILREKIIKSSPTINSEMELCRSSSANGGLNPILVMLNDSGPSTTGVRVGKGFQAEVPEWSGPIGSDDACAELLEIDSSEFSSFQEKNLKRSTRISPICNWLQCQEVVDRAKGTICGKWRRAPIFEVQTDKWECFCAIHWDPAHADCAAPQESETDQILKELKHVELLRTRLAAKRSKCSGKKGGQ 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01387 557 ProSiteProfiles Zinc finger CW-type profile. 466 526 IPR011124 GO:0008270
Accr7g01387 557 ProSitePatterns Zinc finger PHD-type signature. 322 366 IPR019786 -
Accr7g01387 557 Gene3D - 470 535 - -
Accr7g01387 557 FunFam uncharacterized protein LOC106759733 isoform X4 470 535 - -
Accr7g01387 557 PANTHER TRANSCRIPTION INTERMEDIARY FACTOR 244 374 - -
Accr7g01387 557 SUPERFAMILY FYVE/PHD zinc finger 313 375 IPR011011 -
Accr7g01387 557 Pfam PHD-finger 322 368 IPR019787 -
Accr7g01387 557 SMART PHD_3 321 367 IPR001965 -
Accr7g01387 557 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 380 IPR013083 -
Accr7g01387 557 ProSiteProfiles Zinc finger PHD-type profile. 319 369 IPR019787 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01387 322 395 C2H2 Transcription Factor Family AT3G01460 29.487 1.64e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr7g01387 PHD 1.2e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01387 - - tpra:123918328 543.502