Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr7g01332 | ATGGTTTGGGAGGACCTATCCAACATGGCTTTAAGTGCTACAAGTCTAACATTAGAATCACCATGCATGTTGGAGCATGTAATGCTGCTAGCGGGAATTGTGTTTTTATCAATATGGTTGACCCAAATGGTAATAAAAGGTGTGGAACTGATCAAGAAGAAGAAGAACAAGGTCTCAGATCAGGACACAGAGATTCTTCCCACTGTACTGAAATATGGTTTGGCTTACAAAACCAGTATATTTTGCAGCACTCTACTGGTTGCAGTTCATGTAATCTTGTTGCTTCTGATGGTGGTAAAAGGTGAGACTCAGTGCAACTCAAAACTCGTGGCTTTTACATCAGAGACAGTTCTGGTATTATCATGGGTAATCACATTGATATCAGTTTGCAAGATACCAAAAATCAACGTTAAGTTCCCTTTGATGCTAAGATCATGGTGGGTTTGCAGCTTTTTTTTGTGTATTATCAACTTAGCCTTTCATAGCCATTTCAGAATCAGCAAACAGACACAGATTGGATGGAGGGAATATGCAGATTTGCTTGGCCTGCTTGCTTCAGCAGTTCTATTGGGCATTTCAATAAGAGGAAGAACTGGGATTGTGTTGATTGCTACAGATGGAATCTCTGAGCCACTTTTGAGTGAAAAAAGTGGCAAGGAATCAGACTCTTCTTCCAAGAAGGAATCTTTATATGGGAAATCTACTTTCATTCAACTCATTACCTTCTCATGGCTCAATCCCTTGTTTGCAGTAGGCTACAAGAAAGCCCTTGAACCGAGTGACATTCCCGATGTTGCCATCGGGGAATCTGCTGAATTTCTATCATCATCATTTGATGAGAGCCTAAGAAAGGTCAAGGAGGCTGATGGGACCTCAAATCCATCTGTCTTCAAGGCAATCTATCTCTTTGCTAGGAAGAAGACTCTGATCAACGCATGCTTTGCAGTAGCAAGTGCTGCAGCATCATATGTTGGCCCATACCTAATCACTGACTTTGTGAATTTCTTAGCTGAGAAGGGAAGCCGCGGGCTGAATCAAGGATACATGTTGTCACTTGGATTCTTATGTGCCAAAATGATTGAGACAATAACTCAGAGGCAATGGATTTTTGGCGCTCGACAAGCAGGTCTTCGCCTTAGAGTGGCATTGATAGCACACATATACAAGAAGGGCTTAAATCTGTCAAGTAGATCGCGCCAAAGTCACAGCGGTGGTGAGATCATGAACTATATGAGTGTAGATGTGCAGAGAATCACAGATTTTATGTATTACATAAATGTCATATGGATGCTTCCGGTGCAAGTAACCTTAGCGGTCTACATTTTGCACACGAATCTTGGTTTGGGTTCGTTGGCTGCGCTAGTTGCCACTCTGACAGTTATGGCTACGAACATACCTCTTACGAGAATACAGAAAAGATACCAATCTAAGATCATGGAGGCTAAGGACAGCAGGATGAAAGCCACATCAGAAGTCCTTAGAAACATGAAGACTTTGAAACTTCAAGCCTGGGATACTGAATTCCAACAAAGGTTAGAAGAACTGAGGGAAACAGAATCCATCTGGTTATGGAAGTCATTAAGACAGGGAGCACTTTCTGCTCTTATCTTCTGGGCCTCACCCACATTTATTTCCTTGGTAACCTTCTGGGTATGTATGTGGATGGGGATTGAACTAACAGCCGGAAGAGTTTTATCTGCCTTCGCCACATTTCGGATGTTACAAGATCCTATATTTAGCTTACCTGATTTACTCAATGTCATTGCTCAGGGGAAAGTATCAGCAGACAGAATTGCTTCTTATCTCAGGAAAGAAGAAGTTCAACATAACGCCATTGAGAATGTTCCAAGGGACCAAACCGAGTTCGACATAGTTATTGAAAACGGAAGATTCAGCTGGGATTCTGAGACAAGCAATCCAACCCTTGATGGAATAGATTTAAGAGTCAAAAGAGGAACCAAGGTGGCGATTTGTGGGACTGTAGGTTCCGGTAAGTCTAGCCTACTTTCCGGCATTCTGGGCGAAATGTATAAGCAATCTGGGACAGTGAAGATCAGTGGAACAAAAGCTTATGTTCCACAATCACCATGGATATTGACTGGAAATTTTAGGGACAATATTACCTTTGGAAAGGAATACAATAGTGTCAAGTATGAGAAGACTATTGAAGCATGTGCTTTGATAAAGGACTTTGAGCTATTCTCCTGTGGTGACCTGACAGAGATTGGAGAAAGAGGGATCAATATGAGTGGAGGACAGAAGCAAAGGGTACAAATAGCTCGTTCGGTTTACCAAGATGCCGACATATATCTCTTTGACGACCCTTTTAGCGCCGTTGATGCTCACACCGGAAGCCACCTCTTCAAGGAGTGCCTTATGGGGGTTCTCAGAGAAAAAACTATACTTTATGTTACCCACCAAGTGGAGTTTCTTCCAGCGGCAGACCTTATTCTGGTGATGCAAAATGGAAGGATTGCACAAGCTGGAACCTTTGAACAACTTCTAAAGCAAAATATTGGGTTTGAAGTATTAGTTGGAGCACATAGCCAAGCTCTAGAGTCAATTCTCATGGTTGAGAATTCAAGCAGAACAACTCTAAATCCAGAACCCGAAGGCGAATCCAATGTCCATTCTCAGTCAAATTCAGAGCTTTCTCACACTCTACATAACACAGAGCAGGGAAGTCCCCCAGAGATCAAAGAAAAAGAAGGTAAACTAGTGCAAGATGAAGAAAGAGAAAGAGGAAGCATTTCAAGAGAAGTTTACTGGACCTATTTGACCACCGTCAAAGGCGGTGCCCTGGTTCCTTTCATAATTTTGGCTCAATCTTCATTCCAAGTACTTCAGGTTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCTACATCAAGTGATGCTAAGCCTACATATGACATGGATTTTATCCTACTTGTTTATATGGCACTTTCTGTTGGGAGTGCACTTTGTGTGCTCCTAAGAGCCATTCTAGTGGCAAAAGCTGGACTTTGGACTGCTCAGAAACTATTTATCAAAATGTTGCATAGCGTACTTCGAGCACCAATGTCATTTTTTGATTCAACTCCAAATGGCAGAATTTTGAACAGGGTCTCCACAGATCAAAGTGTGGTAGACTTGGAAATGGCAAACAAATTGGGATGGTGTGCTTTCTCAATAATACAGATTCTGGGTACCATTGCCGTAATGTCACAAGCGGCATGGCAAGTTTTTGTCATCTTCATTCCAGTAACCGCCGTTTGCGTGTGGTATCAAAGATACTATACACCAACAGCAAGAGAACTGGCTCGCTTGTCACAAATACAAATAACTCCAATTCTGCATCATTTTACAGAATCATTAGCAGGAGCAGCATCGATCCGAGCTTTTGATCAAGAAGGCCGTTTTGTGTATTCAAATCTCGAGCTTATTGACAACTACTCAAAACCATGGTTCCATAACGTATCTGCAATGGAATGGCTTTCTTACAGATTGAATATACTATCCAATTTTGTTTTCGCCTTCTCGCTGGTTTTGCTTGTAGTCCTTCCAGAAGGAGTCATCGACCCAAGCATTGCAGGGTTGGCAGTAACTTATGGGATCAATTTGAATGTCCTTCAAGCTGCAGTCATATGGAACATCTGTAATGCAGAAAATAAGATGATATCTGTTGAGAGAATCATTCAATACACAGATATCAAAAGTGAAGCAGCCCTTGTGATTGAAGATTCTAGGCCACCAAACAACTGGCCTGAAATTGGAACAATATGTTTCAAAAACTTGCAGATACGTTATGCGGAACATCTACCGTGCGTTCTGAAAGACATAAATTGCACATTTCCTGGAAGGAAGAAAATTGGTGTCGTGGGACGAACTGGGAGCGGAAAATCAACCTTAATACAGGCCATTTTCAGGATTGTTGAACCTTGGGAAGGAAGCATTATAATTGATGATTTGGATGTATGCAAGATTGGTCTACATGACTTAAGGTTGAGGCTTAGTATCATACCACAGGATCCCACAATGTTTGAAGGCACAGTTAGAGGAAACTTGGACCCACTTGATCAATACTCTGACCAGCAAGTGTGGGAGGCTTTGGATAAATGTCAGCTTGGTCAGCTGGTAAGATCAAAGCAAGAGAAATTGCAGGCCTCAGTGGTTGAAAATGGAGAAAACTGGAGTGCAGGCCAAAGGCAACTATTTTGCCTTGGAAGGGCCTTACTGAAGAAAAGTAGCATTCTTGTGCTAGATGAAGCAACAGCATCAGTTGATTCTGCAACTGATGGAGTGATACAGAAAATTATCAGTCAAGAATTCAAAGATAGAACTGTTGTCACAATAGCCCATCGAATCCATACTGTTATCGCTAGCGATTTAGTTTTGGTCCTCAGTGATGGGAAAATCGTAGAGTTCGATGCCCCATCGAAGTTACTTGAAAGAGAAGATTCCTTCTTTTCTAAACTCATAAGGGAATACTCAAGAAGATCACAGAGTTTCAACTGCTTGGCCACTCAAAATGGCCAATGA | 4521 | 0.4185 | MVWEDLSNMALSATSLTLESPCMLEHVMLLAGIVFLSIWLTQMVIKGVELIKKKKNKVSDQDTEILPTVLKYGLAYKTSIFCSTLLVAVHVILLLLMVVKGETQCNSKLVAFTSETVLVLSWVITLISVCKIPKINVKFPLMLRSWWVCSFFLCIINLAFHSHFRISKQTQIGWREYADLLGLLASAVLLGISIRGRTGIVLIATDGISEPLLSEKSGKESDSSSKKESLYGKSTFIQLITFSWLNPLFAVGYKKALEPSDIPDVAIGESAEFLSSSFDESLRKVKEADGTSNPSVFKAIYLFARKKTLINACFAVASAAASYVGPYLITDFVNFLAEKGSRGLNQGYMLSLGFLCAKMIETITQRQWIFGARQAGLRLRVALIAHIYKKGLNLSSRSRQSHSGGEIMNYMSVDVQRITDFMYYINVIWMLPVQVTLAVYILHTNLGLGSLAALVATLTVMATNIPLTRIQKRYQSKIMEAKDSRMKATSEVLRNMKTLKLQAWDTEFQQRLEELRETESIWLWKSLRQGALSALIFWASPTFISLVTFWVCMWMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSADRIASYLRKEEVQHNAIENVPRDQTEFDIVIENGRFSWDSETSNPTLDGIDLRVKRGTKVAICGTVGSGKSSLLSGILGEMYKQSGTVKISGTKAYVPQSPWILTGNFRDNITFGKEYNSVKYEKTIEACALIKDFELFSCGDLTEIGERGINMSGGQKQRVQIARSVYQDADIYLFDDPFSAVDAHTGSHLFKECLMGVLREKTILYVTHQVEFLPAADLILVMQNGRIAQAGTFEQLLKQNIGFEVLVGAHSQALESILMVENSSRTTLNPEPEGESNVHSQSNSELSHTLHNTEQGSPPEIKEKEGKLVQDEERERGSISREVYWTYLTTVKGGALVPFIILAQSSFQVLQVASNYWMAWVCPTSSDAKPTYDMDFILLVYMALSVGSALCVLLRAILVAKAGLWTAQKLFIKMLHSVLRAPMSFFDSTPNGRILNRVSTDQSVVDLEMANKLGWCAFSIIQILGTIAVMSQAAWQVFVIFIPVTAVCVWYQRYYTPTARELARLSQIQITPILHHFTESLAGAASIRAFDQEGRFVYSNLELIDNYSKPWFHNVSAMEWLSYRLNILSNFVFAFSLVLLVVLPEGVIDPSIAGLAVTYGINLNVLQAAVIWNICNAENKMISVERIIQYTDIKSEAALVIEDSRPPNNWPEIGTICFKNLQIRYAEHLPCVLKDINCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPWEGSIIIDDLDVCKIGLHDLRLRLSIIPQDPTMFEGTVRGNLDPLDQYSDQQVWEALDKCQLGQLVRSKQEKLQASVVENGENWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIASDLVLVLSDGKIVEFDAPSKLLEREDSFFSKLIREYSRRSQSFNCLATQNGQ | 1506 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr7g01332 | 1506 | ProSitePatterns | ABC transporters family signature. | 749 | 763 | IPR017871 | GO:0005524|GO:0016887 | |
| Accr7g01332 | 1506 | FunFam | ABC transporter C family member 5 | 898 | 1235 | - | - | |
| Accr7g01332 | 1506 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1245 | 1484 | IPR027417 | - | |
| Accr7g01332 | 1506 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 624 | 847 | IPR003439 | GO:0005524 | |
| Accr7g01332 | 1506 | FunFam | ABC transporter C family member 3 | 1237 | 1489 | - | - | |
| Accr7g01332 | 1506 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 937 | 1201 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Accr7g01332 | 1506 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 618 | 840 | IPR027417 | - | |
| Accr7g01332 | 1506 | SUPERFAMILY | ABC transporter transmembrane region | 936 | 1234 | IPR036640 | GO:0005524|GO:0016020 | |
| Accr7g01332 | 1506 | CDD | ABC_6TM_ABCC_D1 | 322 | 598 | IPR044746 | GO:0140359 | |
| Accr7g01332 | 1506 | Gene3D | - | 622 | 853 | IPR027417 | - | |
| Accr7g01332 | 1506 | FunFam | ABC transporter C family member 10 | 292 | 606 | - | - | |
| Accr7g01332 | 1506 | SMART | AAA_5 | 1280 | 1465 | IPR003593 | GO:0016887 | |
| Accr7g01332 | 1506 | SMART | AAA_5 | 651 | 824 | IPR003593 | GO:0016887 | |
| Accr7g01332 | 1506 | CDD | ABCC_MRP_domain1 | 624 | 824 | - | - | |
| Accr7g01332 | 1506 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1256 | 1488 | IPR003439 | GO:0005524 | |
| Accr7g01332 | 1506 | MobiDBLite | consensus disorder prediction | 862 | 912 | - | - | |
| Accr7g01332 | 1506 | CDD | ABCC_MRP_domain2 | 1252 | 1472 | - | - | |
| Accr7g01332 | 1506 | MobiDBLite | consensus disorder prediction | 895 | 912 | - | - | |
| Accr7g01332 | 1506 | Pfam | ABC transporter | 1271 | 1419 | IPR003439 | GO:0005524 | |
| Accr7g01332 | 1506 | SUPERFAMILY | ABC transporter transmembrane region | 304 | 606 | IPR036640 | GO:0005524|GO:0016020 | |
| Accr7g01332 | 1506 | Gene3D | - | 1236 | 1490 | IPR027417 | - | |
| Accr7g01332 | 1506 | Pfam | ABC transporter transmembrane region | 945 | 1181 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Accr7g01332 | 1506 | Pfam | ABC transporter transmembrane region | 309 | 573 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Accr7g01332 | 1506 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 309 | 590 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Accr7g01332 | 1506 | CDD | ABC_6TM_ABCC_D2 | 935 | 1229 | IPR044726 | GO:0140359 | |
| Accr7g01332 | 1506 | Gene3D | ABC transporter type 1, transmembrane domain | 282 | 607 | IPR036640 | GO:0005524|GO:0016020 | |
| Accr7g01332 | 1506 | Gene3D | ABC transporter type 1, transmembrane domain | 898 | 1235 | IPR036640 | GO:0005524|GO:0016020 | |
| Accr7g01332 | 1506 | MobiDBLite | consensus disorder prediction | 862 | 894 | - | - | |
| Accr7g01332 | 1506 | FunFam | ABC transporter C family member 5 | 609 | 856 | - | - | |
| Accr7g01332 | 1506 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 233 | 1491 | - | - | |
| Accr7g01332 | 1506 | Pfam | ABC transporter | 642 | 776 | IPR003439 | GO:0005524 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr7g01332 | Accr-Chr7 | 32191283 | 32202178 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr7g01332 | 603 | 897 | Calmodulin-binding Proteins | AT2G36910 | 27.070 | 1.33e-22 | 103 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr7g01332 | - | - | gmx:100817486 | 2248.4 |