Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01331 ATGGGTTCTGCTTTTCTGAACTCTCCGTATAAGCCATGGACGCCTGCTGATGCTGTTCTTCGAGATTGTTCTCAAGGAATCTGCAGCTTCTATTGCCCTCAATGGTGCTCTGTCATCTACCCTCCTCCTCCTTTACCTTCTCTCACCGCCATCGGAGTTTCCGCCACCGCCGGTGACGATGACGACGACTCTTCTTCATTCCGGCTCTCTCCTCTAATAGTCGCTCTCATCAGCATCCTAGCAAGTGCTTTCGTTTTAATCACTTACTACGCCATCATCTCTCGATTCTCTACAAGACGGTCCCGAATCCACGAAAACGACAGCAACCAGTGGGTAAACGACAATGACGCGTCGGCGATTCAAGCCGCTAATACCGGCGGCGGCGGGTTGGACGACGCCGTCATCAGATCAATCACAGTCTTTAAGTACAAGAAAGGAGATGGATTAATCGAAGGCACGGATTGCTCTGTGTGTCTCAGCGAATTCCAAGATTGTGAGAGTTTGAGATTGTTGCCCAAATGCAACCACGCGTTTCATCTTCCTTGTATCGATACATGGTTGAGATCGCACTCGAGTTGTCCTCTATGCAGATCTAATATTGTCAAATCCAACACTTGCTCGTCTTCTTCTTCTGGTAATTTACCGAATGAGGAAGCTTTGCGAACTCAGAGCGTGAATGTGTCTGCGTTGGAACATCAGTTCAGGAACGATACAGTGATCGTGATTCAGGGTTCAGAACATGAAATTCAGGTCGGTTTTGCAGGGAATTTGGGGGAGAGGAATGGGATTGAATCGAATCAAGGAAGATTGTTGTTGGTTGCTGATATATCGAGAAGTAGTGAAGATGATGAGGATGAAGAAACCGAGATGGGATCGTCGAAGCAAAATCAAAGAGGAAAGTGA 903 0.4729 MGSAFLNSPYKPWTPADAVLRDCSQGICSFYCPQWCSVIYPPPPLPSLTAIGVSATAGDDDDDSSSFRLSPLIVALISILASAFVLITYYAIISRFSTRRSRIHENDSNQWVNDNDASAIQAANTGGGGLDDAVIRSITVFKYKKGDGLIEGTDCSVCLSEFQDCESLRLLPKCNHAFHLPCIDTWLRSHSSCPLCRSNIVKSNTCSSSSSGNLPNEEALRTQSVNVSALEHQFRNDTVIVIQGSEHEIQVGFAGNLGERNGIESNQGRLLLVADISRSSEDDEDEETEMGSSKQNQRGK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01331 300 SUPERFAMILY RING/U-box 149 203 - -
Accr7g01331 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 207 IPR013083 -
Accr7g01331 300 Pfam Ring finger domain 154 197 IPR001841 -
Accr7g01331 300 ProSiteProfiles Zinc finger RING-type profile. 155 197 IPR001841 -
Accr7g01331 300 FunFam RING-H2 finger protein ATL54 130 203 - -
Accr7g01331 300 PANTHER RING-H2 FINGER PROTEIN ATL16 62 270 IPR044600 GO:0016567|GO:0016740
Accr7g01331 300 MobiDBLite consensus disorder prediction 275 300 - -
Accr7g01331 300 CDD RING-H2_EL5-like 154 197 - -
Accr7g01331 300 SMART ring_2 155 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01331 Accr-Chr7 32172887 32173789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01331 12 300 C3H Transcription Factor Family AT5G17600 40.683 3.35e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01331 - - pcin:129291142 464.922