Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01248 ATGATAATAGCCAACACATTTGGCAGCAAGCTGAAATCTTTTCTCAGAAACATGCCTTCTTCTTCTTCTTCAACTTGGTTCACTTCCCTCTCATGTTCTTCCCCAGTAAAACAAGCCCAAGGTGGTACTTTTCTTTCAACTCTAGCTCAATGGCTTGAGTTTGTCTTTCTCTCTCCATGTCCTCAGAGAGCTCTATTGACCGCCATTGATGTTGTGCTCATCTTCGTTCTCTTTGTTCTCGCCGTCAAGAAGCTCTACTCTAGGTTCACCTCCAATGACGACCACCCAGATGCAGCATCTGAACTCGACAAGCCCCTTATCAGAGGACATAACAGAGATTTCATCAGAACAACAACGTGGTTTAAGCTTACTCTAGTTGTGACTGTTGTTTTGACTATATTGTACGCTGTTGGGAGTGTTCAGGGATTTATCAGAGACACACGAATCGATGGATTGTTTTGGTTGGTTCAAGCAGTGACTTATGGGATTCTTGCAATCTTAATCATTCATGAAAAGAGATTTCAAGCTGTTTCTCACCCTCTTCCACTTCGAATCTTCTGGATATTAAACTTCGTTATGTCATGTTTGTTCGTGGTTTCTGGGATTGTTCGTTTGGTCTCTTCGGAAGAAACTGATGAAGGAGGAGGCTTTGACTTAAGGAATGATGATACTCTCGGCTTCATTTCTTTCCCTCTTTCTCTGTTTCTCTTCCTTGCCGCCATTAAAGGATCTACTGGTATCACCTTCACAACACAGGAAACTGAATCTCTGATTGTTGATGGGGAAACTGATATTAAATCAAACGTGACTGGTTTTGCCTCAGCTTCTTTAGCTTCCAAGGCCTTTTGGCTATGGATAAATCCATTATTGAGTAAAGGTTACAAGTCACCTTTGAAGATCGATGAAGTCCCATCACTTTCACCAGAACATAGAGCTGAAAGAATGTCAGTTTTGTTTGAACATAAATGGCCTAAGCCACAAGAAAGGTCCAAGCATCCTGTTCTAACCACACTTCTTCGATGCTTCTGGAAGGAAGCAGCTTTTACTGCTTTCCTTGCTGTTGTTCGTCTTAGTGTTATGTTCATAGGTCCTGTTCTTATCCAAAGCTTTGTGGATTTCACATCTGGTAAGAGAAGCTCTGTTTATGAAGGATACTACCTGGTTTTAATCCTCCTGGTTGCGAAGTTCATAGAAGTCTTAGCCACTCATCATTTCAACTTCAACTCTCAGAAGCTAGGAATGCTTATTAGATGCTCTCTTATTACCTCGTTGTACAAGAAAGGGTTAAGGTTGTCTTGTTCTGCAAGACAAGACCATGGGATTGGAACTATAGTTAATTATATGGCTGTGGATGCACAACAGCTTTCTGATATGATGCTGCAGCTTCATGCTGTGTGGATGATGCCATTTCAAGTTGGGATTGCCTTAGTTCTGCTTTATAAGTACCTGGGCGCCGCGGTGGTCACGGCTTTGCTTGGAATTGTGGGAGTTCTTGTTTTTGTCATATTTGGCACTCGAAGGAACAATCGTTTCCAGTTCAATGTGATGAAGAATCGCGATTCCAGGATGAAGGCTGTTAATGAGATGCTGAATTACATGAGGGTGATAAAGTTCCAAGCTTGGGAAGAGCATTTCAATAAGAGGATTATGGGTTTTCGTGAGTCAGAATTCAGCTGGCTTTCCAAGTTTTTGTATTCAATTTCTGGGAACATCATTGTGATGTGGAGCACACCACTTTTAATATCAACTCTAACCTTTGGGACAGCGATTTTGCTCGGAGTTCCACTCGATGCAGGCACGGTTTTCACCACAACAACGATCTTTAAGATATTGCAGGAACCTATTAGGACTTTCCCACAATCAATGATCTCTCTTTCACAAGCCATGATATCACTTGGGAGGCTGGATAGGTACATGAGCAGCAAGGAATTATCAGATTCCTCGGTAGAGAGGGTGGAAGGCTGCCATGGGCAAACCGCGGTAGAGGTGAAAGATGGCACCTTTAGCTGGGATGATGATGATACTAAGAGGGATTATGACTTGAAAAACATTAATATCAATATAAAAAAGGGCGATCTCACCGCCATTGTTGGCACTGTCGGCTCGGGGAAATCTTCTCTGCTAGCATCAATTCTTGGTGAGATGCACAAAGTTTCCGGCAAGGTTCGGGTTTGTGGGACTACGGCGTATGTAGCTCAAACATCATGGATTCAAAATGGCACAATTCAGGATAACATCTTGTATGGATTACCAATGGACAGACACAAGTACATTGAAGTTGTGAGAGTCTGTTGCTTGGACAAAGACTTGGAAATGATGGATGATGGCGATCAAACGGAGATCGGAGAGCGTGGCATCAACCTTAGTGGAGGCCAGAAGCAGAGAATACAACTTGCTAGGGCTGTGTATCAGGATTGTGATATCTATCTTCTTGATGACGTCTTTAGCGCCGTTGATGCTCATACCGGCTCGGCAATATTCAAGGAATGTGTTAGGGGAGCTTTAAAAGGAAAGACTGTTATTCTTGTAACACACCAAGTAGACTTCTTGCACAATGTTGATCTTATAATGGTGATGAGAGATGGAATGATAGTTGAATCTGGGAAGTATAATGATTTAGTAAATTCTGGAATGGATTTTGGAGATCTGGTAGCAGCACACGAAACTTCTATGGAACTTGTAGAACAAGGCAAAGAAATGCCTGGTGAAAATTCCCCAAGGCCGTCCAAATCTCCGAGATCTCCGAAGCCGGCTTCTAGCTTCAGGGAGGCCAATGGTGAAAGCAATTCTGTTGACCAACCAAAAGCTGGCAAGGAAAATTCTAAACTCATAAAAGATGAAGAGAGGGAAACTGGCAAAGTGAGCCTGCATATTTATAAGTTGTATTGTACTGAGGCTTATGGATGGTGGGGCATTACAGGAGTAATTCTTATTTCTTTGTTATGGCAAGGAGCTTTGATGGCTGGTGATTATTGGCTAGCATATGAAACCTCTGAAGAGCAAGCTCGAGTCTTTAACCCTTCTCTTTTTATCTCCATCTATGCCGCTATCGCCGCGATTTCGGTTGTTTTGGTGATTATAAGATCCTTCTCTGTCACCATCTTGGGGCTTAAGACAGCACAGCTTTTCTTCTCCCAGATTCTTAATTGCATCCTTCATGCACCCATGTCTTTCTTCGATACCACGCCTTCCGGAAGAGTTTTAAGTAGGGCATCCACTGATCAGACTAATGTTGATGTGTTTCTCCCATTTTTTGTGGGCATTGTGATTTCCATGTACATCACAGTGCTTAGCATCTTCATTGTTACATGTCAAAACTCTTGGCCAACAGTTTTCTTGCTGATACCTCTGATTTGGTTGAACATATGGTACCGGGGTTATTTCCTCTCTTCATCTCGCGAATTGACTCGCCTGGATTCGATAACAAAAGCACCTGTTATTCACCACTTCTCAGAGAGCATTTCAGGGGTTATGACAATCCGCGCATTCAGAAAGCAGAGGAGCTTTTGTGAAGAAAATGTTAAACGAGTTAACGAAAATCTGCGCATGGATTTCCACAACAATGGGTCCAATGAGTGGTTGGGTTTTCGCTTAGAATTGCTCGGGAGCTTGGTCTTTTGTTTTTCTACTATGTTCATGATTATATTACCCAGCAATATCATAAAGCCAGAAAACGTTGGCTTATCTCTCTCTTATGGCTTGTCCCTAAATGCTGTGTTGTTCTGGGCCATCTACATGAGTTGCTTCATTGAGAACAGAATGGTATCTGTGGAGAGGATTAAGCAATTCACAAAGATTCCATCCGAAGCAGCATGGCGTATTAAGGATCGCCTACCTCCCCCGAATTGGCCCGCCCACGGCAATGTTGATATCAAAGAGTTGCAGGTTAGGTATCGTCCCAACACTCCTTTGGTTCTCAAAGGCATCACATTGAGCATTAGTGGTGGAGAGAAGGTTGGTGTTGTTGGAAGAACAGGAAGTGGGAAATCTACTTTGATCCAAGTTTTCTTCAGGCTTGTGGAACCTTCTGGAGGAAGAATGATCATCGACGACATCGACATAACTACTTTAGGCCTTCACGACCTTAGGTCTCGATTCGGTATCATTCCCCAGGAGCCTGTTCTTTTTGAAGGCACTGTTAGGAGCAATATTGATCCAACTGAACAATATTCAGATGAAGAAATATGGAAGAGTTTGGAACGCTGTCAACTAAAAGATGCCGTGGCTTCCAAGCCAGAGAAACTGGATTCTTTAGTGGTTGATAATGGAGAGAATTGGAGTGTGGGACAGAGGCAGTTGTTGTGTTTGGGGAGGGTTATGCTAAAGCGAAGCCGCCTCTTGTTCTTGGATGAAGCAACAGCTTCTGTGGATTCACAAACTGATGCTGTGATTCAGAAGATCATCAGAGAGGACTTTGCAGCTTGTACCATAATCAGCATTGCTCACAGAATACCAACAGTCATGGACTGTGACAGGGTTCTTGTCATAGATGCAGGGAGAGCAAAAGAATTTGATAAACCCTCCAAGTTGCTTCAGAGGCCATCATTATTTGGGGCATTAGTTCAAGAATATGCCAACCGCTCCTCAGAGCTCTGA 4596 0.4297 MIIANTFGSKLKSFLRNMPSSSSSTWFTSLSCSSPVKQAQGGTFLSTLAQWLEFVFLSPCPQRALLTAIDVVLIFVLFVLAVKKLYSRFTSNDDHPDAASELDKPLIRGHNRDFIRTTTWFKLTLVVTVVLTILYAVGSVQGFIRDTRIDGLFWLVQAVTYGILAILIIHEKRFQAVSHPLPLRIFWILNFVMSCLFVVSGIVRLVSSEETDEGGGFDLRNDDTLGFISFPLSLFLFLAAIKGSTGITFTTQETESLIVDGETDIKSNVTGFASASLASKAFWLWINPLLSKGYKSPLKIDEVPSLSPEHRAERMSVLFEHKWPKPQERSKHPVLTTLLRCFWKEAAFTAFLAVVRLSVMFIGPVLIQSFVDFTSGKRSSVYEGYYLVLILLVAKFIEVLATHHFNFNSQKLGMLIRCSLITSLYKKGLRLSCSARQDHGIGTIVNYMAVDAQQLSDMMLQLHAVWMMPFQVGIALVLLYKYLGAAVVTALLGIVGVLVFVIFGTRRNNRFQFNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMGFRESEFSWLSKFLYSISGNIIVMWSTPLLISTLTFGTAILLGVPLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRYMSSKELSDSSVERVEGCHGQTAVEVKDGTFSWDDDDTKRDYDLKNININIKKGDLTAIVGTVGSGKSSLLASILGEMHKVSGKVRVCGTTAYVAQTSWIQNGTIQDNILYGLPMDRHKYIEVVRVCCLDKDLEMMDDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSAIFKECVRGALKGKTVILVTHQVDFLHNVDLIMVMRDGMIVESGKYNDLVNSGMDFGDLVAAHETSMELVEQGKEMPGENSPRPSKSPRSPKPASSFREANGESNSVDQPKAGKENSKLIKDEERETGKVSLHIYKLYCTEAYGWWGITGVILISLLWQGALMAGDYWLAYETSEEQARVFNPSLFISIYAAIAAISVVLVIIRSFSVTILGLKTAQLFFSQILNCILHAPMSFFDTTPSGRVLSRASTDQTNVDVFLPFFVGIVISMYITVLSIFIVTCQNSWPTVFLLIPLIWLNIWYRGYFLSSSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQRSFCEENVKRVNENLRMDFHNNGSNEWLGFRLELLGSLVFCFSTMFMIILPSNIIKPENVGLSLSYGLSLNAVLFWAIYMSCFIENRMVSVERIKQFTKIPSEAAWRIKDRLPPPNWPAHGNVDIKELQVRYRPNTPLVLKGITLSISGGEKVGVVGRTGSGKSTLIQVFFRLVEPSGGRMIIDDIDITTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDAVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSKLLQRPSLFGALVQEYANRSSEL 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01248 1531 Gene3D - 1273 1521 IPR027417 -
Accr7g01248 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 347 627 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr7g01248 1531 Gene3D - 638 905 IPR027417 -
Accr7g01248 1531 CDD ABC_6TM_ABCC_D1 348 635 IPR044746 GO:0140359
Accr7g01248 1531 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 273 1525 - -
Accr7g01248 1531 FunFam ABC transporter C family member 5 935 1270 - -
Accr7g01248 1531 Pfam ABC transporter transmembrane region 1005 1225 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr7g01248 1531 Pfam ABC transporter transmembrane region 350 614 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr7g01248 1531 CDD ABCC_MRP_domain2 1287 1507 - -
Accr7g01248 1531 SUPERFAMILY ABC transporter transmembrane region 329 642 IPR036640 GO:0005524|GO:0016020
Accr7g01248 1531 SMART AAA_5 1315 1508 IPR003593 GO:0016887
Accr7g01248 1531 SMART AAA_5 690 871 IPR003593 GO:0016887
Accr7g01248 1531 CDD ABC_6TM_ABCC_D2 972 1264 IPR044726 GO:0140359
Accr7g01248 1531 MobiDBLite consensus disorder prediction 894 944 - -
Accr7g01248 1531 ProSitePatterns ABC transporters family signature. 788 802 IPR017871 GO:0005524|GO:0016887
Accr7g01248 1531 Pfam ABC transporter 681 814 IPR003439 GO:0005524
Accr7g01248 1531 Coils Coil 1521 1531 - -
Accr7g01248 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 661 886 IPR003439 GO:0005524
Accr7g01248 1531 CDD ABCC_MRP_domain1 661 862 - -
Accr7g01248 1531 FunFam ABC transporter C family member 10 330 643 - -
Accr7g01248 1531 Pfam ABC transporter 1306 1454 IPR003439 GO:0005524
Accr7g01248 1531 MobiDBLite consensus disorder prediction 914 936 - -
Accr7g01248 1531 FunFam ABC transporter C family member 3 1272 1523 - -
Accr7g01248 1531 SUPERFAMILY ABC transporter transmembrane region 969 1269 IPR036640 GO:0005524|GO:0016020
Accr7g01248 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1281 1522 IPR027417 -
Accr7g01248 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 658 884 IPR027417 -
Accr7g01248 1531 Gene3D ABC transporter type 1, transmembrane domain 329 637 IPR036640 GO:0005524|GO:0016020
Accr7g01248 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 974 1252 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr7g01248 1531 FunFam ABC transporter C family member 4 644 905 - -
Accr7g01248 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1291 1523 IPR003439 GO:0005524
Accr7g01248 1531 Gene3D ABC transporter type 1, transmembrane domain 935 1270 IPR036640 GO:0005524|GO:0016020
Accr7g01248 1531 Coils Coil 1160 1180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01248 Accr-Chr7 28281480 28288447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01248 661 879 Calmodulin-binding Proteins AT2G36910 31.197 3.93e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01248 - K05666 gmx:100793361 2327.36