Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01246 ATGGCCTCTTCTCCTCCTTCTCCTGTTGATTCCCCCACCACTACCCCTCCCACCGATCCTCCCACCGATCCTCCCACCGCCGTCCCTCTCGCGGTTGCTATTCCTCCGGCTTTGCCCTCTTCGCAACAGCCTTCATCTTCCTCTCGCCGCCTTCCTCCGCCGTGCTGGTCTTCTGAGGAGACTGCTGCTTTGATTGATGCGTATCGTGACAAGTGGTATTCTCTTGGCCGGGGTAATCTCAAGGCCACGCATTGGCAGGATGTTGCCGATGCTGTTACCTCCCGCTGCCCTGGCGCGTCACCGCCCAAAACCGCGGTGCAGTGCCGCCACAAGATGGAGAAGCTCCGGAAGCGGTATCGCACGGAGATCCAACGCGCGCGCAATCTGCCTGTTGCGAGGTTCAATTCCTCTTGGGTTCACTTTAAGCGGATGGATGTCATGGAGAAAGGTCCCTCCCCGGTGAAACCTGAGAACGATTCCGATGATAGCCCTGATGAGTTTGATGCCGATGAGGATAATGACTTGTACGAGGAATTCAGAAGCGGTAGTGGGTCCAACACGAGGAGCCTGAACAAGTTGTATCGAAACGGAATGGGCGGAAGCAACGGCAATGGCAGTGGCGGATTTCGGATTCGAATTCCCAATGGGGTAAGCATCGCCCAACCTGGGAATTCCAAATTATATGGGAAATTTTCTGATCAGAAGTATAACTATAACAATAACAACCCCGGTTCAAAATCTGGGCATGGCTTTAATAGTCCCAATTATGAAACTAGGGTTTTGAAAGAGAGAAGTGGATTGGGGAAAAGGGAAAGAGAGAGGGAGAGAGATCCTGTGAGCGAGATGGTGTGTGCAATTAAGGTTTTGGGCGATGGGTTTGTGAAGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATTGAGAGTATGCGAATGGAGATGGAGATGAAGCGAACTGAGATGATTCTGGAGTCACAGCAGAGGATTGTGGAGGCATTTGCTAAAGCAGTTTCAGAGAAGAAGACAAAGAGAATGGCTTCATCACCTTCAGAATCGTAG 1059 0.5175 MASSPPSPVDSPTTTPPTDPPTDPPTAVPLAVAIPPALPSSQQPSSSSRRLPPPCWSSEETAALIDAYRDKWYSLGRGNLKATHWQDVADAVTSRCPGASPPKTAVQCRHKMEKLRKRYRTEIQRARNLPVARFNSSWVHFKRMDVMEKGPSPVKPENDSDDSPDEFDADEDNDLYEEFRSGSGSNTRSLNKLYRNGMGGSNGNGSGGFRIRIPNGVSIAQPGNSKLYGKFSDQKYNYNNNNPGSKSGHGFNSPNYETRVLKERSGLGKRERERERDPVSEMVCAIKVLGDGFVKMEQMKMEMAREIESMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKTKRMASSPSES 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01246 352 Coils Coil 109 129 - -
Accr7g01246 352 Coils Coil 300 320 - -
Accr7g01246 352 MobiDBLite consensus disorder prediction 1 32 - -
Accr7g01246 352 Gene3D - 56 121 - -
Accr7g01246 352 MobiDBLite consensus disorder prediction 148 170 - -
Accr7g01246 352 ProSiteProfiles Myb-like domain profile. 56 116 IPR001005 -
Accr7g01246 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 28 339 IPR044823 -
Accr7g01246 352 MobiDBLite consensus disorder prediction 38 54 - -
Accr7g01246 352 SMART 118neu2 63 152 IPR006578 -
Accr7g01246 352 FunFam Trihelix transcription factor ASIL2 56 121 - -
Accr7g01246 352 Pfam Myb/SANT-like DNA-binding domain 54 146 IPR044822 -
Accr7g01246 352 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01246 Accr-Chr7 28254484 28255542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01246 11 147 Trihelix Transcription Factor Family AT3G14180 36.170 1.23e-19 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr7g01246 Myb_DNA-bind_4 1.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01246 - - pcin:129290378 545.428