Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01198 ATGACAAGTGACCAAGATGCATCTTCCTCATATGCTTCCAACTTCAATTCAACCCCAAGAACCTGCAAGTATGACATTTTCTTGAGTTTTAGAGGCGAAGACACTTGTAAAGGCTTCACAGATCACTTGTATCACACATTAAAAGGGAGTGGATTCAGTGTTTTTAGGGATGATGAAGAGCTTGAGAGAGGAGAAGTCATTTCAGAAGAACTCCTACAAGCAATTGAGGACTCTCATTTCGCAATTGTTGTTCTCTCCAAAAATTATGCCTCTTCTTCATGGTGTTTAAATGAGCTCCAACATATTCTTGACTCAAGAGATAATTTGTGTCAACAAGTCTTTCCCATATTTTATGATGTAGATCCTTCTAATGTACGGAATCAAAAAGGAAGTTTTGAGAAAGCTTTTGTTGGGCACCAAAAGCTTCAAAGGGACAATAAGGACTTAAAAAGTTGGAGAGAATCTCTCACAAAAGTTGCTAACTTATCTGGTTGGGATTGCAAGGATCGGCCTGAAGCAAAACTTATTGAGACGGTGGTTGAGGAGCTGGGGACCAAATTATGTTCTAAACTACCACCTTATTTTGAAGACTTAATTGGAATTGAAAATAAAATAGAACAATTGGATCCATTATTGGAGATAGGCTTGAATGATGTTCGATTTGTAGGAATATGGGGCTTACCGGGTGTGGGTAAGACAACAATAGCTAGGGCTGTTTTTGACAAATATCATCGCCAATTTGAAATCAAATGCTTTCTTCACAATGTTAGGGCAACTTCAGAAAGAGATGGTGGTGAGGTTCACTTACAAAGTAAACTTATTTCACATCTCAAAATTAGAAATATGGAGATTGAAGACATATTCGAAGGGAACAGAATAATCCAAAAGTATTTTAGGGATAAAAAAGTTTTACTTATCCTTGATGACGTTAGCCATACAAGACATTTAGAAATTTTGGCTAACAGCCCCAATTGGTTTGGTGCTGGGAGTAGGGTAATCATGACAACTAGAGATTCAGGCTTGTTGCGTAGAGTGCATGAAGTATATGTACATGAGGTTAAAACTATGGACCCAGATGAATCCCTTCAACTCTTTTGTTCAAAAGCATTTAAAAGAGGTGAACCTCTGGAGGATCTTTTGGAGATGTCTAAAACTGTTTGTGTTTATGTGAAAGGCCTTCCTTTAGCTCTCTCTATTTTGGGTTCTTTTTTGTGTGGAAGAAGTAGTATGCTGGAATGGGAAGATGCTTTGGATATGTTGAAGAAAAATCTACATGACGATATTCTTAGAGTATTTAAACTAAGTTTTGATGCATTAAATGGCATAGAACAAGCAATATTTTTAGATATTGCTTGCTTCTTCAATGGGTGGAGCAAAAAGGTCATAACACATCTATTGGAAAGTTGTGGATTCAATGCAAAAATTGGAATAGCAACTCTTCGAGAAAAGTCTATGCTAAAGGTTTATGACGATTGTTTAGTTATGCATGATTTGCTTGAACAAATGGGTAGGAGAATTGTTGTAGATAAGTCTCCTAATGATGTTGAAAATCGCAGTAGATTGTGGTCTAAGGAAGATATTGACAATGTGATGAAAAACAAACGGGGCACAAAAAAAATACAAGGTATGGTTTCATCCACATCTTGTGAGGCATCTTGGGATCCTAATGCCTTTTCAAAATTCCATAACCTCATATTACTCATCATAACAAGTGACTTCAACCTTCCTGATGGCCTCCAATGTCTTTCCCATGCTTTGAAAGTACTTCACTGGACAAAATATCCCTTAGACACTCTTCCTCCTCAAACAGGATTGGATGAGCTTGTTGATCTTAAAATGTGTCATAGCAAATTGAAGAAACTTTGGAATAAAAGCTTGTGTTCTAGGAATCTGAAGTTTTTGGACTTGAGTTATTCCCAAAACTTGATTGAAACTCCTGATTTCTCTAAACTTCCAAATCTGGAAAGATTAGAACTTGAAGGTTGTGAAGCTCTTGTTGACCTTCATGCTTCAATTGGACAACACAAAAAGGTTCAAGTGTTGAATTTGAAAGGTTGCAAAAATCTTAGAGCCCGTTGTCCAAAAAAATTCGAAATGAGTGCCTTGAAAGAATTTGTTCTTTGTGGGTGCATTCAAGTTAAATATCTCCCAGAGTTTGGGGAAAGCATGAAAAATCTAGAAATGCTTGATGTAGGGGAGACAAATTTAGTGAAGCTTCCAGAGTCACTTGGATTATTGAGTGGTCTTAAGACATTGAGGTTAAAGGGCTGCAAAAATCTTGTTTTCCTTCCCCAAAGCATTCACAAGTTGAAGCGTCTTGTACTTGTTGATATTGCTGGTTGCTCAAAATTTGCTAGATTGCCAGAAAAGTTGAATGAAATGGAAGCCTTGGAGGAGATTGACGCAAGTGAGACCGATATAACTGAAGTACCTTGTTCCATCAGTGGTTTAAAAAATGTCAAGAAACTATCATTTCGAGGGTACAAAAGGTCAACGTCGAACTCTTGGAGCTGGATTCGTCCATTGAAACGCGCACTATTTTGGGGGCAGTCAATTCCTAAGGGTTTAACAGTTCCTGCTTCAATATGGAGTATTAAATCACTAAATGAATTAGATTTAAGCTACTGCAATATTGTTGATGGATCCATTCCATTTGACTTGGGTGGCTTATCATCATTGAAGAAATTAGATCTAAGTGGAAACTTGTTTAAGAATCTACCTATAGGCTGTATGTCTAATCTGTTGAAATTGGAATATCTTTATTTGAATTTATGTTCAGAACTTCAGTCGTTGCCGCAGTTAGGACCACGTGTATATAGAATGGATGCAAAGGAATGTGGTTCAATGGAAACAGTGGTAGACGAACAAATATTTCATTTCTTTGCTTCAATTAACCAGGCGGAAAATCCTAGGAAAGGTGAATTATTCACGATGACAATTCCAGGGAGTGAAATACCATCATGGTTTGAGAATCAAATTGATCTGTGTCTGAATGATGAAGGTGAAGCTTCAATAATGATAGAAGTGCCTCCTTGTGGGGAAGAAATGTTAGGAATTGGGTTATGCGTTGTGCTGGATAATGATAAGTTTTATTCCACTGGGCCCAACAAAAGATGTTTTAGTTGGCCTTGTTGGTGGGTTGATTCTGTTCTCAATGTCGTACCCATAGCGGTATACCGTTTAGACGACGTAGAAATGAAGTCAAGCCACCTTTGGATAGTGTTATTGACACCAAAAAGAAGAAGAAGTAGAAGTAGAAGAAGAAGAAGAAGGGAACTCCATCATATTCTACAATTAAGCAAGCGCAGTCAACTTCCCTTGACGCTCAGGTTCTATGGTAAGAAAGTTGATACAATGAAGTGTGGGTGGCGTGTTATAAGCAAAGCCGATTTTGGAAACTGCACCTGCTCAATGAGTCAATAA 3423 0.3766 MTSDQDASSSYASNFNSTPRTCKYDIFLSFRGEDTCKGFTDHLYHTLKGSGFSVFRDDEELERGEVISEELLQAIEDSHFAIVVLSKNYASSSWCLNELQHILDSRDNLCQQVFPIFYDVDPSNVRNQKGSFEKAFVGHQKLQRDNKDLKSWRESLTKVANLSGWDCKDRPEAKLIETVVEELGTKLCSKLPPYFEDLIGIENKIEQLDPLLEIGLNDVRFVGIWGLPGVGKTTIARAVFDKYHRQFEIKCFLHNVRATSERDGGEVHLQSKLISHLKIRNMEIEDIFEGNRIIQKYFRDKKVLLILDDVSHTRHLEILANSPNWFGAGSRVIMTTRDSGLLRRVHEVYVHEVKTMDPDESLQLFCSKAFKRGEPLEDLLEMSKTVCVYVKGLPLALSILGSFLCGRSSMLEWEDALDMLKKNLHDDILRVFKLSFDALNGIEQAIFLDIACFFNGWSKKVITHLLESCGFNAKIGIATLREKSMLKVYDDCLVMHDLLEQMGRRIVVDKSPNDVENRSRLWSKEDIDNVMKNKRGTKKIQGMVSSTSCEASWDPNAFSKFHNLILLIITSDFNLPDGLQCLSHALKVLHWTKYPLDTLPPQTGLDELVDLKMCHSKLKKLWNKSLCSRNLKFLDLSYSQNLIETPDFSKLPNLERLELEGCEALVDLHASIGQHKKVQVLNLKGCKNLRARCPKKFEMSALKEFVLCGCIQVKYLPEFGESMKNLEMLDVGETNLVKLPESLGLLSGLKTLRLKGCKNLVFLPQSIHKLKRLVLVDIAGCSKFARLPEKLNEMEALEEIDASETDITEVPCSISGLKNVKKLSFRGYKRSTSNSWSWIRPLKRALFWGQSIPKGLTVPASIWSIKSLNELDLSYCNIVDGSIPFDLGGLSSLKKLDLSGNLFKNLPIGCMSNLLKLEYLYLNLCSELQSLPQLGPRVYRMDAKECGSMETVVDEQIFHFFASINQAENPRKGELFTMTIPGSEIPSWFENQIDLCLNDEGEASIMIEVPPCGEEMLGIGLCVVLDNDKFYSTGPNKRCFSWPCWWVDSVLNVVPIAVYRLDDVEMKSSHLWIVLLTPKRRRSRSRRRRRRELHHILQLSKRSQLPLTLRFYGKKVDTMKCGWRVISKADFGNCTCSMSQ 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01198 1140 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 165 IPR035897 -
Accr7g01198 1140 Gene3D - 356 440 IPR042197 -
Accr7g01198 1140 SMART till_3 23 162 IPR000157 GO:0007165
Accr7g01198 1140 SMART LRR_typ_2 890 913 IPR003591 -
Accr7g01198 1140 SMART LRR_typ_2 723 746 IPR003591 -
Accr7g01198 1140 SMART LRR_typ_2 651 675 IPR003591 -
Accr7g01198 1140 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 189 - -
Accr7g01198 1140 Pfam Leucine Rich Repeat 608 622 IPR011713 -
Accr7g01198 1140 SUPERFAMILY "Winged helix" DNA-binding domain 427 531 IPR036390 -
Accr7g01198 1140 Gene3D - 18 187 IPR035897 -
Accr7g01198 1140 Pfam TIR domain 23 187 IPR000157 GO:0007165
Accr7g01198 1140 SUPERFAMILY L domain-like 552 927 - -
Accr7g01198 1140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 450 IPR027417 -
Accr7g01198 1140 Gene3D Ribonuclease Inhibitor 518 838 IPR032675 -
Accr7g01198 1140 Pfam NB-ARC domain 216 426 IPR002182 GO:0043531
Accr7g01198 1140 Gene3D - 188 352 IPR027417 -
Accr7g01198 1140 Gene3D Ribonuclease Inhibitor 850 957 IPR032675 -
Accr7g01198 1140 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 717 IPR044974 GO:0006952
Accr7g01198 1140 PRINTS Disease resistance protein signature 297 311 - -
Accr7g01198 1140 PRINTS Disease resistance protein signature 390 404 - -
Accr7g01198 1140 PRINTS Disease resistance protein signature 221 236 - -
Accr7g01198 1140 PRINTS Disease resistance protein signature 649 665 - -
Accr7g01198 1140 ProSiteProfiles TIR domain profile. 22 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01198 Accr-Chr7 25226243 25268830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01198 24 832 WRKY Transcription Factor Family AT4G12020 31.484 1.62e-98 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01198 - - pcin:129302825 1236.09