Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01192 ATGAGCCAGTGTGTTCCTAGCTGGGATTTGGATGAAAATCCCACAGCCCCAAGAGTGCCTCTTCGTTCAAATTCCAATTCTACTCCTCCTGATGTTCCCATATTAGATTACGAAGTTGCAGAGCTAACATGGGAAAATGGACAGCTCTCAATGAATGGTTTGGGTTTGCCCAAAGTACCAGAGAAACACCCAGCCGCTGCCGCCGCCGCTAGGTCAACAACCCCTTCATCCAAATGCACATGGGATAAGCCTCGTGGAAGTGGCACCTTGGAGTCTATTGTCAACCAAGCCACTACATTTCCCCACCGTGGCAAATCCATATTCGACGACGTCGGGGCCGCAGCTGACAGAGACGACTTAGTGCCATGGTTTAATCCACAAAGAGCGGCATCTGCCGCCGTAATGGCTACTACTGCTTCGGCTGCGTCGAATACCATGACCATGGATGGCCTAGTGCCTTGTTCAAACCGTACGGACGAGCAGCAAACCACGCAGGTTATGCACTCAGTGACCTGTGGTGGCACACTTGGAAGGTGCATGTTGGGCTATTCCACACGTGTGGGGTCTTTTAGTGGGCCCACCAATCGAGAGGACGAGGCGGTGTTGGCAGCGAAAAGCGCGAGGGTGGGGCGTGTGCCGGTGGCTCCTGAGTGGAGTGGCAGAGATCAAAGTGTGAGTGGAAGCGCAACATGTGGAAGAGAAAGCCAGCGCGTGACGTTGGACACATGCGAGAAGGAATCAGGGATGGGCTTCATTTCCACCTCCATGGGATCGCCGGAAAACACTAGCTCCGCTAAGCAGTGCACCAAAACTAATGCAGCGGACGACTACGATTCAATTTGCCATAGCAAAAAAGAGACAGGTGATGAGGAGGACGAAAAGAAAGGAATAGGAAAATCCTCACTGTCCACTAAAAGGAGTAGAGCTGCTGATATACACAACCAATCTGAAAGGAAAAGGAGAGATAAGATAAACCAGAGGATGAAGACATTGCAAAAGCTGGTCCCAAATTCGAGCAAGTCAGATAAAGCCTCAATGCTGGATGAAGTGATAGAGTATCTAAAGCAGTTACAAGCACAAGTGCAAGTGATGAGTAAAATGAATATGTCAGCCATGATGCTACCAATGGCCATGCAACAACAGCTTCAAATGGCTATGATGCCTCCCATGGGCATGGGCTTGAGAATGGGAATTGACATGAATACCCTTGGCCGTCATGCTAATAATATTGGCATCCCGCCGGTGTTCCATCCTCCGGCGGCATTCATGCCCTTGGCTTCAAGGGATGCCTCACTTGGCACTGATAGATCAACAACGGTGAAGCCTGACCCATTATCCACATTTTTTGGAGGGCAACCACAGCCTCTGACCATGGATGCATACATTAGGATGGTTGCCATGTATCAGCAGCTATACCAACAACCTCCAGCTTCTAATTCCAAGGGCTGA 1449 0.501 MSQCVPSWDLDENPTAPRVPLRSNSNSTPPDVPILDYEVAELTWENGQLSMNGLGLPKVPEKHPAAAAAARSTTPSSKCTWDKPRGSGTLESIVNQATTFPHRGKSIFDDVGAAADRDDLVPWFNPQRAASAAVMATTASAASNTMTMDGLVPCSNRTDEQQTTQVMHSVTCGGTLGRCMLGYSTRVGSFSGPTNREDEAVLAAKSARVGRVPVAPEWSGRDQSVSGSATCGRESQRVTLDTCEKESGMGFISTSMGSPENTSSAKQCTKTNAADDYDSICHSKKETGDEEDEKKGIGKSSLSTKRSRAADIHNQSERKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQVQVMSKMNMSAMMLPMAMQQQLQMAMMPPMGMGLRMGIDMNTLGRHANNIGIPPVFHPPAAFMPLASRDASLGTDRSTTVKPDPLSTFFGGQPQPLTMDAYIRMVAMYQQLYQQPPASNSKG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01192 482 Coils Coil 314 334 - -
Accr7g01192 482 Gene3D - 303 369 IPR036638 GO:0046983
Accr7g01192 482 MobiDBLite consensus disorder prediction 1 32 - -
Accr7g01192 482 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 308 357 IPR011598 GO:0046983
Accr7g01192 482 MobiDBLite consensus disorder prediction 221 237 - -
Accr7g01192 482 MobiDBLite consensus disorder prediction 310 325 - -
Accr7g01192 482 SMART finulus 314 363 IPR011598 GO:0046983
Accr7g01192 482 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 312 380 IPR036638 GO:0046983
Accr7g01192 482 FunFam transcription factor UNE10 isoform X1 303 368 - -
Accr7g01192 482 MobiDBLite consensus disorder prediction 284 300 - -
Accr7g01192 482 MobiDBLite consensus disorder prediction 284 325 - -
Accr7g01192 482 MobiDBLite consensus disorder prediction 218 238 - -
Accr7g01192 482 CDD bHLH_AtPIF_like 308 369 IPR047265 -
Accr7g01192 482 Pfam Helix-loop-helix DNA-binding domain 313 358 IPR011598 GO:0046983
Accr7g01192 482 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 39 480 IPR031066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01192 Accr-Chr7 24626947 24635135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01192 1 465 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 45.851 2.55e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr7g01192 HLH 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01192 - - pop:7497350 503.442