Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01184 ATGTTGGATTATGATTGGGGAAATCCGTCTACGATAATGCTCACCGGAAACGACGAAACTGCAGCCACGGCCGCCGCAGATTCTGAACAAACGCACCGGCAAATCTTCGACCACTATAATTCTCACCCGTTCTTACCCGACCACCTTATTTCTCAAGCTCCACCAGGACCCACACCGACCACTACCACCTCCGATTTCTCTCTCGTACACCACCATCAACAATTTCACTCGCAACCCCATCACCACCATATCCACCACCAACAACAACAACATTCTCTCTTTGACACACGCGCCTTCTCCGTCGCGTCATCGTCTCATTTCCCTCCTCCACCACCGCAACTGCCACCTCACTCCATGTTCTCCCTTGACCCACTCCCTCCGGTCAACGCCGGCAACTGCGGGCCTGGTGGTGGGTTTCTGATGGTACCTAAGTCCGAAGATGTGGGCCGGTCCACGGACTTCTCGGCGTCTCGAATTGGACTCAACCTCGGCGGCCGGACATACTTCTCCAGCTCCGAGGACGACCTCGTGAACCGGCTGTACCGCCGATCCAGGCCGTTTGAACCGGGTTCGACGATGTTGTTCAGCAACAACTCGCCGAGATGCCAAGCCGAGGGATGCAATGCTGATCTCTCACACGCTAAGCACTATCACCGCCGACACAAGGTGTGCGAGTTTCACTCCAAAGCTGCAACCGTGATCGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAATGTAGCAGGTTTCATCTTCTTTCGGAGTTTGATAATGGAAAACGAAGCTGCAGGAAAAGATTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAACAACCACCTCATCAAGAAATTCAGAAATCTCACGTCGAAAAGCCTCGCAATTTTACTTTGGACATTGCAGCAAAGGGGTCCTCGTCGGATTCGGGAAACCAGTCATCATCATCGGTGACAGTGGCGGTGTCCCCGCCGGATTATTTCCAGCAAAAGCCATATCATCAAAACACGACAGCATCAAGGACACTGTTTTTCTCAAGTGGGTAG 1041 0.5274 MLDYDWGNPSTIMLTGNDETAATAAADSEQTHRQIFDHYNSHPFLPDHLISQAPPGPTPTTTTSDFSLVHHHQQFHSQPHHHHIHHQQQQHSLFDTRAFSVASSSHFPPPPPQLPPHSMFSLDPLPPVNAGNCGPGGGFLMVPKSEDVGRSTDFSASRIGLNLGGRTYFSSSEDDLVNRLYRRSRPFEPGSTMLFSNNSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPPHQEIQKSHVEKPRNFTLDIAAKGSSSDSGNQSSSSVTVAVSPPDYFQQKPYHQNTTASRTLFFSSG 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01184 346 MobiDBLite consensus disorder prediction 277 295 - -
Accr7g01184 346 MobiDBLite consensus disorder prediction 299 346 - -
Accr7g01184 346 MobiDBLite consensus disorder prediction 268 346 - -
Accr7g01184 346 SUPERFAMILY SBT domain 200 279 IPR036893 GO:0003677|GO:0005634
Accr7g01184 346 Gene3D - 197 263 IPR036893 GO:0003677|GO:0005634
Accr7g01184 346 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 83 318 IPR044817 GO:0003677
Accr7g01184 346 Pfam SBP domain 202 275 IPR004333 GO:0003677
Accr7g01184 346 ProSiteProfiles Zinc finger SBP-type profile. 199 276 IPR004333 GO:0003677
Accr7g01184 346 FunFam Squamosa promoter-binding-like protein 14 194 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01184 Accr-Chr7 24316243 24317986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01184 1 249 SBP-box Gene Family AT1G02065 46.875 2.92e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr7g01184 SBP 1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01184 - - gmx:100802206 392.119