Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01183 ATGGACTTTGAAGGGAACAACATGTTCGCTAATAGAGAGCAAAACTGTGGCGGAAATAGTAATAACAGTACCCACTTTTCTTGGGATTTATGGGAACCGTCTTCTTCTAACAATTCTACCCTCATCAACACTTTTTACGCCCCCGGCGCCACCGACACGGCGGAGACCTCGGCGGCTGTCTCTGCAACCACTCAGGCGGGCCTGGCCAACGCTCTCATGTTTCTTCCTCAGGCTAGTGGTCGTAATGGTAGTACTGTGGCTGATCGTGACCACGACGGCGGCGGAATCGGCGTTGATCATGGTGGACACCACCAGCATCGGCAGCGGCTGCAACAGCAGGAGGCGCTGTACTCTGGAGATGGGGCCCACGTGCATCTGGACCCACATCTCATGTGTTTGAAGCTGGGGAAGAGGCATTATTTTGAGGACGCTAATGCTCCTCTTGGCGGAGGCGGTGGTGGGTTTGCCTTGGCGGGAAAGAGAGGGAGAGGGTTCTACGGAGGAAGTGCGAAGGCGGCGACGACGGTGCCGAGGTGTCAGGTGGAGGGATGCCACGTGGCGCTGTTGAACGCGAAGGAGTATCACAGGAGACACAAAGTTTGTGAGATGCATTCCAAGGCAGCGAAGGTTGTGGTGTTAGGGTTGGAGCAGAGATTTTGTCAACAGTGTAGCAGGTTTCATGTGGTATCGGAGTTCGATGATTCCAAGAGGAGTTGCCGTAGGAGATTGGCTGGCCACAACGAACGAAGAAGAAAGAGCTTCCATGATTCTGTCACTAGGAATTCCTCGTCTCAAGAAAATAAGTTACTAGCGGGAGGGTTTCCATACTTATCATCACCTCCACCACCATCATCTGGCTGTGCTCTCTCTCTTCTGTCATCGTCCAAGAGCGCCGACCATTATTCATGGCTTTGCCCGGCCGATCTCTCGGCGAGATGTAGTGCCGCCCTACGAGAACTCATAGCTGAGAACCGAGCAGCTGCCATGGCTAAACAAATCATTTTGGAAAGAGACTGGCACTACTCACACCACCACCACCACCACCACCACCAAGAAGATGAAGATGAAGATGATGACCATAATAAGGAGATTCCGCTTCAATATAATTTCAATTTCTCTCAACAACAGCACCAGATATTTCCCTAG 1146 0.5201 MDFEGNNMFANREQNCGGNSNNSTHFSWDLWEPSSSNNSTLINTFYAPGATDTAETSAAVSATTQAGLANALMFLPQASGRNGSTVADRDHDGGGIGVDHGGHHQHRQRLQQQEALYSGDGAHVHLDPHLMCLKLGKRHYFEDANAPLGGGGGGFALAGKRGRGFYGGSAKAATTVPRCQVEGCHVALLNAKEYHRRHKVCEMHSKAAKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSFHDSVTRNSSSQENKLLAGGFPYLSSPPPPSSGCALSLLSSSKSADHYSWLCPADLSARCSAALRELIAENRAAAMAKQIILERDWHYSHHHHHHHHQEDEDEDDDHNKEIPLQYNFNFSQQQHQIFP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01183 381 MobiDBLite consensus disorder prediction 1 20 - -
Accr7g01183 381 FunFam Squamosa promoter-binding-like protein 14 170 240 - -
Accr7g01183 381 SUPERFAMILY SBT domain 177 258 IPR036893 GO:0003677|GO:0005634
Accr7g01183 381 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 88 299 IPR044817 GO:0003677
Accr7g01183 381 Pfam SBP domain 179 252 IPR004333 GO:0003677
Accr7g01183 381 ProSiteProfiles Zinc finger SBP-type profile. 176 253 IPR004333 GO:0003677
Accr7g01183 381 Gene3D - 170 240 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01183 Accr-Chr7 24265783 24268112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01183 131 252 SBP-box Gene Family AT1G27370 53.175 5.50e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr7g01183 SBP 5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01183 - - pcin:129291456 494.967